Gene Rsph17029_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0543 
Symbol 
ID4895169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp568404 
End bp568913 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content67% 
IMG OID640111128 
Productcell wall hydrolase, SleB 
Protein accessionYP_001042431 
Protein GI126461317 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGACGA GACTTCTCCG GACATCGATC CGTCTGGTCC TCTGCACGGC CCCGGCGCTC 
CTGCTGCTGG GATGCGGCCT CTTCCATCGT CCGAGCGAAC TGGAATGCAT GGAGCGGGCC
ATGTATTTCG AATCGCACCG CTCGAGCCGG GACGGAATGG TGGCGGTGGG CACGGTGGTG
ATGAACCGCG TGAACTCCGG CCAGTTTCCG AACACCGTCT GCGGCGTGGT CGGCCAGCGC
AACCAGTTCG CGCCGGGCGT GATGTCGAAG CGGATGGACT CGCGCTCGCT GCCCCGGGTG
CGCGAGGCCG CGCGGGCCGT TCTGCGGGGC GAGCGGCACC CGTTCGTGGG CAATGCCATG
TTCTTCCACA CGGCGGGTCA CCGCTTTCCC TATGACAACA TGCATTACAC GCTCGTGACC
GGCGGCAATG CCTTCTACGA GAAGCGCCGG AGCGAGCTCG TGACCCAGCC GGTGCCGCCG
CCGCCGGTCG ACGGGCTGAC CGGCTGGTAG
 
Protein sequence
MATRLLRTSI RLVLCTAPAL LLLGCGLFHR PSELECMERA MYFESHRSSR DGMVAVGTVV 
MNRVNSGQFP NTVCGVVGQR NQFAPGVMSK RMDSRSLPRV REAARAVLRG ERHPFVGNAM
FFHTAGHRFP YDNMHYTLVT GGNAFYEKRR SELVTQPVPP PPVDGLTGW