| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0404 |
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| Symbol | |
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| ID | 4896050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 418463 |
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| End bp | 419734 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640110988 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001042292 |
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| Protein GI | 126461178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACC GCCGCCTCAT CGCCGAAGTC GAGGCCCGCC GCGCCGATCT GGTGGCGCTG
ACGCAGGATC TCGTGCGCAT TCCCACGCTG AACCCGCCGG GGCGGAACTA CCGCGCGCTC
TGCGACATGC TGGCGGCCCG TCTCGCGCCG CAGTTCGAGG TCGAGCTGGT GCGGGCCCAC
GGCGCGCCCG GCGATTCCGA GACCTATCCG CGCTGGAACC TGATCGCCCG GCGACAGGGC
GCGCGGGACG GCGACTGCGT GCATTTCAAC TCGCATCACG ACGTGGTCGA GGTGGGCCAC
GGCTGGACGC GCGACCCGTT CGGGGCCGAG GTCGAGGGCG ACCGGCTCTA CGGACGCGGC
GCCTGCGACA TGAAGGGCGG GCTCGCGGCC TCGGTGATCG CGGCCGAGGC CTTCCTTGCC
GTCTGCCCGG ATTTCGCCGG CAGCATCGAG ATCTCGGCCA CCGCCGACGA GGAGTCGGGC
GGCTTCGGCG GCGTGGCCTA TCTGGCCCGG CAGGGCCGTT TCGCCCATGT CCAGCATGTG
CTGATCCCCG AACCCTTGCA CAAGGACCGG ATCTGCCTCG GCCATCGCGG CGTCTGGTGG
GCCGAGGTCG AAACGCAGGG GCGCATCGCC CATGGCTCGA TGCCCTTCCT GGGCGACAGC
GCGATCCGGC ACATGGGCGC GCTTCTGGCC GAGATCGAGG AGCGGCTCTA TCCGCTGCTG
GCCACTCGCA CCACCGCCAT GCCGGTGACG CCCGAGGGGG CGCGGCAATC CACGCTCAAC
ATCAATTCGA TCCACGGCGG CGAGCCCGAG CCCGAGCCGG GCTACACCGG CCTGCCCGCG
CCCTGCGTGG CCGACCGCTG CCGCATCGTG ATCGACCGCC GCTTCCTGAT CGAGGAGGAT
CTGGACGAGG TGAAGGCCGA GCTGCGCGCC TTGGCCGAGC GGCTGGCCGA GGCGCGGCCG
GGCTTCGCCT TCGAGATCCG CGACCTGTTC GAGGTGCGCC CCACCCTCAC CGACCGCGAC
GCGCCGGTGG TGCGCTCGAC CGCCGCCGCC ATCGAGCGCG TTCTGGCGCG GCAGGCGGAA
TATGTGGTCT CGCCCGGCAC CTACGATCAG AAGCACATCG ACCGGATCGG CAAGCTGAAG
AACTGCATCG CCTATGGGCC GGGGCTGCTG CATCTGGCGC ACCAGCCGGA CGAATGGGTG
GGCATCGCGG ATATGCTCGA CAGCGCGAAG GTCATGGCAC TGGTGCTGGC GGATCTGCTC
GCCCCCAAGT GA
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| Protein sequence | MDDRRLIAEV EARRADLVAL TQDLVRIPTL NPPGRNYRAL CDMLAARLAP QFEVELVRAH
GAPGDSETYP RWNLIARRQG ARDGDCVHFN SHHDVVEVGH GWTRDPFGAE VEGDRLYGRG
ACDMKGGLAA SVIAAEAFLA VCPDFAGSIE ISATADEESG GFGGVAYLAR QGRFAHVQHV
LIPEPLHKDR ICLGHRGVWW AEVETQGRIA HGSMPFLGDS AIRHMGALLA EIEERLYPLL
ATRTTAMPVT PEGARQSTLN INSIHGGEPE PEPGYTGLPA PCVADRCRIV IDRRFLIEED
LDEVKAELRA LAERLAEARP GFAFEIRDLF EVRPTLTDRD APVVRSTAAA IERVLARQAE
YVVSPGTYDQ KHIDRIGKLK NCIAYGPGLL HLAHQPDEWV GIADMLDSAK VMALVLADLL
APK
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