Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0299 |
Symbol | ispH |
ID | 4897711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 316587 |
End bp | 317546 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640110881 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001042187 |
Protein GI | 126461073 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGC CTCCCCTCAC CCTCTATCTG GCCGCCCCCC GGGGCTTCTG CGCGGGCGTG GACCGCGCGA TCAAGATCGT CGAGATGGCG CTCGAGAAAT GGGGCGCTCC CGTCTATGTC CGGCACGAGA TCGTGCACAA CAAGTTCGTC GTCGACAGGC TGCGCGACAT GGGCGCGGTC TTCGTCGAGG AGCTGGACGA GGCGCCGACC GACCGGCCGG TAATTTTCTC GGCCCATGGC GTCCCGAAGG CGATCCCCGC CGAGGCCGAG CGGCGGAACA TGGTCTATGT CGATGCCACC TGCCCGCTGG TCAGCAAGGT CCATCTCGAG GCCGAACGGC ACCACGAGAA CGGGCTGCAG ATGATCATGA TCGGTCACGC GGGCCATCCA GAGACCGTCG GCACCATGGG TCAGCTGCCC GAGGGCGAGG TCCTGCTGGT CGAGACGGTG GAGGATGTGG CAGGGCTCGA AGTGCGGGAT CCCGAGCGGC TGGCCTACAT CACCCAGACC ACGCTCTCGA TCGACGACAC TGCCGCCATC GTGGCCGCGC TGCGCGAGCG TTTCCCGGCC ATCGCGATCC CGCGCAAGGA AGACATCTGC TACGCCACGA CCAACCGGCA GGGCGCGGTC AAGGCCATCG CGGGCCGGAT CGACGCGCTA CTGGTGATCG GGGCCCCGAA TTCCTCGAAC TCGAAGCGGC TCGTGGAAGT GGGTCGCGCC GCCGGCTGCC GCGTGGCGCA GCTCGTGCAG CGCGCCACCG ATATCGACTG GGAGGCGCTG CAGGGCGCCA CCTCCGTCGG CGTGGCCGCC GGAGCCTCGG CCCCGGAGGT GCTGGTGGAC GAGGTGATCG CCGCCTTCCG CGCCCGGTTC GACACGACCG TCAAGGCCGT CGAGACCGTG AAAGAGCGCG TCGAGTTCAA GGTGCCGCGC ATCCTGCGCG AGCCTGCCGA GACCCCGTGA
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Protein sequence | MTMPPLTLYL AAPRGFCAGV DRAIKIVEMA LEKWGAPVYV RHEIVHNKFV VDRLRDMGAV FVEELDEAPT DRPVIFSAHG VPKAIPAEAE RRNMVYVDAT CPLVSKVHLE AERHHENGLQ MIMIGHAGHP ETVGTMGQLP EGEVLLVETV EDVAGLEVRD PERLAYITQT TLSIDDTAAI VAALRERFPA IAIPRKEDIC YATTNRQGAV KAIAGRIDAL LVIGAPNSSN SKRLVEVGRA AGCRVAQLVQ RATDIDWEAL QGATSVGVAA GASAPEVLVD EVIAAFRARF DTTVKAVETV KERVEFKVPR ILREPAETP
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