Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0259 |
Symbol | |
ID | 4898041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 281616 |
End bp | 282590 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640110842 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_001042150 |
Protein GI | 126461036 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGA AATCCCTTGC CCTCGCCGCG CTGCTCGGCG CCGCCGCCGT CCTGCCGGCC GCCGCTCAGG AAGTGGTGGT GCGCGTCGCC TACGAGAACA ACCCGGGCGA ACCCACCGAC CTCGTGATGA ACCGCTGGGC CGAACTCGTG AAGGAAGCCT CGGACGGCAA CGTGGCCCTC GAGCTCTATC CCTCGTCGCA GCTCGGCGCG AAGCAGGATG TGATCGAGCA GGGCCTGCTC GGCGTCAACG TCATCACCAT CGCCGACGTG GGCTTCCTGA CCGACTACGA CCCCGACCTC GGCATCCTCT TCGCCCCCTA CCTGACCGAC AGCCCCGAGC AGCTCTTCAA GATCTACGAG AGCGACTGGT TCAAGGAGAA GGAAGCCGCG CTGCGCGAGA AGGGCGTGCA TATCGTCATC TCGAACTACC TCTACGGCAC CCGTCAGCTT CTGGCCAAGA AGAAGGTCGA GAAGCCCGAG GATCTGGCCG GCATGAAGAT CCGCGTGCCC AACAACATCA TGCAGATCAA GGCGTTCGAG CTGATGGGCG CCACGCCCAC CCCGATGCCG CTGGGGGATG TCTACCCGGC GCTGACCCAG GGCGTGATCG ACGGTGTCGA GAACCCGCTG CCCGTCCTCT ACGGCGGCAA GTTCCACGAG CAGGCCAAGG AGCTGTCGAT GATCAGCTAC CTGACCAACA CCTCGCTCTG GCTCGGCGGC GAGGCCTATT TCTCGACCCT CGATCCCGAA GTGGTGACCA TGCTGCACGA GACCGGCTAT CAGGCGGGCC TCTACAGCCA GGAGCTCGCG GCGCAGGAAG AGGCCAAGAT GCTCGAGGCC ATGAAGGAAG CGAGCGTCAC CGTGACCGAG CCCGACGTCG AGGCCTTCCG CGAGAAGACC AAGGCCTTCT ACACCATGTT CCCGGAGTGG TCCGAGGGAC TCTACGAGCA GATCCAGGCG GCTCTCGCCG AGTGA
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Protein sequence | MKLKSLALAA LLGAAAVLPA AAQEVVVRVA YENNPGEPTD LVMNRWAELV KEASDGNVAL ELYPSSQLGA KQDVIEQGLL GVNVITIADV GFLTDYDPDL GILFAPYLTD SPEQLFKIYE SDWFKEKEAA LREKGVHIVI SNYLYGTRQL LAKKKVEKPE DLAGMKIRVP NNIMQIKAFE LMGATPTPMP LGDVYPALTQ GVIDGVENPL PVLYGGKFHE QAKELSMISY LTNTSLWLGG EAYFSTLDPE VVTMLHETGY QAGLYSQELA AQEEAKMLEA MKEASVTVTE PDVEAFREKT KAFYTMFPEW SEGLYEQIQA ALAE
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