Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0248 |
Symbol | deoA |
ID | 4897868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 269909 |
End bp | 271216 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640110831 |
Product | thymidine phosphorylase |
Protein accession | YP_001042139 |
Protein GI | 126461025 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02643] thymidine phosphorylase [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.363539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGCGC GATCGATCAA CGCAAAGCTG CGCCGGGGCG AAGTGCCCTC GGCCGCTGAA CTGGGCTGGT TCGCGGAAGG TCTGGCCTCG GGCCATGTCA CCGATGCGCA GGCCGGCGCC TTCGCCATGG CGGTCTGCCT GCAGGGGCTG GGCGAGGAGG GGCGTGTGGC CCTGACGCGC GCCATGCGCG ACTCCGGCCG TGTGCTCGCC TGGGATCTGC CGGGGCCGGT GCTCGACAAA CATTCGACGG GCGGCATCGG CGACTGCACC TCGCTGCTCC TCGCGCCGGC TCTGGCTGCC TGCGGGGCCT ATGTGCCGAT GATCTCGGGT CGGGGCCTCG GCCATACGGG GGGCACGCTC GACAAGCTGG AAGCGATCCC GGGCTTCCGC GTGGCCCTGG GCGAAGAGCG GCTGCGCGCG CAGATCGAGG ATGTCCGCTG CGCCATCGTC GCCGCCGACG AGGGCATGGC GCCCGCGGAC CGGCGGCTCT ACCTCATCCG CGACGTGACC GGCACGGTCG AATCGATCGA CCTCATCACC GCGTCGATCC TGTCGAAGAA GCTGGCGGCC GGCCTCGAGG GGCTGGTGCT CGATGTGAAA GTGGGCTCGG GCGCCTTCAT GAAGTCGATG GACGAGGCCG AAGCGCTGGC GCGTGCTCTG GTGGGCACGG CGCAGGGGGC GGGCTGCATG ACATCGGCCC TCATCACCGA CATGAGCCAG CCGCTCGCGA CCGCGGCCGG CAATGCGCTC GAGGTGATCG AGGTGATGGA GACGCTGACC GGCACCTCGA TCAACGCGGC ACTCTGGGAC GTGACGGTGG CGCTCGGCGG TGAGGCTCTG GCGCTGGGCG GGCTTGCCGC CGACGCCGAG GACGGGGCGC ACCGGATCGA GCAGGCGCTG GAAAGCGGGC ACGCGGCCGA GTTCTTCGCC CGCATGGTGG CGGCGCAGGG CGGGCCGGTC GATTTCGTCG AACGCTGGCC CGACCGGCTG CCCTCGGCCC CGGTGATGCG CGAGGTGCCG AGCCTGCGCA CGGGCTTCGT GCTGCGCATC GACACGGCGG CGCTCGGTCA GGCGGTGGTG CATCTGGGCG GCGGGCGGCT GCGCGAGACC GACCGGGTGA ATCCCTCGGT GGGTCTGGCT GATATCGCCG GGATCGGCGA AGAAGTGTCC GAGGATCTGC CGCTCGCCAT GATCCATGCC GCGACCGAGG CCGATGCCGA TGCTGCGGTG GCCGCGATTC AGGCGGCCTA TGTGATCTCG GATCAGGAGC CGGCCGAACC GCCGCTCATC CATGCGAGGA TCGCCTGA
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Protein sequence | MDARSINAKL RRGEVPSAAE LGWFAEGLAS GHVTDAQAGA FAMAVCLQGL GEEGRVALTR AMRDSGRVLA WDLPGPVLDK HSTGGIGDCT SLLLAPALAA CGAYVPMISG RGLGHTGGTL DKLEAIPGFR VALGEERLRA QIEDVRCAIV AADEGMAPAD RRLYLIRDVT GTVESIDLIT ASILSKKLAA GLEGLVLDVK VGSGAFMKSM DEAEALARAL VGTAQGAGCM TSALITDMSQ PLATAAGNAL EVIEVMETLT GTSINAALWD VTVALGGEAL ALGGLAADAE DGAHRIEQAL ESGHAAEFFA RMVAAQGGPV DFVERWPDRL PSAPVMREVP SLRTGFVLRI DTAALGQAVV HLGGGRLRET DRVNPSVGLA DIAGIGEEVS EDLPLAMIHA ATEADADAAV AAIQAAYVIS DQEPAEPPLI HARIA
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