Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0132 |
Symbol | |
ID | 4895266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 147385 |
End bp | 148974 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640110715 |
Product | extracellular solute-binding protein |
Protein accession | YP_001042024 |
Protein GI | 126460910 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.229364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.957515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTCT TCTCGCTCCG AGCCGGCGCC TGCGCGCTGG CGCTGATGGC CGGCACGGCA GGCATGGCCG CGGCGCAGGT GACCATCGTC CGCGGCAACG ATACGGACCC TGCGACGCTC GACCATCACC TGACCTCGAC CGTCGCCGAG AGCCGGATCA TGAACGACCT CTACGAGGGG CTCGTGGTGC AGGACGCGCA GGCGAAGGTC GTGCCCGGCG TGGCCGAAAG CTGGGAGATC TCGGAGGACG GTCTCACCTA CACCTTCAAG CTCCGGGACG ACGCCAAGTG GTCGAACGGC GATCCCGTCG TGGCCGAGGA TTTCGTCTTT GCCCTGCGGC GCATCATGAC CCCGGCCACG GCGGCGGTCT ATGCCAACAT CCTCTACCCG ATCGCCAATG CGGAGGCCAT CGCCACCGGC GCCAAGCAGC CCGAGGAGCT GGGCGTCGAG GCGGTGGACG CGCACACGCT GAAATTCACC CTGAACGCGC CCACGCCCTA TTTCCTCGAA CTGCTGACGC ACCAGTCCTC GCTGCCGATG CACCGGGCGA CGGTCGAGGC GGAAGGGTCG AACTTCACCA AGCCCGGCGT GATGGTCACG AACGGCGCCT ACAAGCTGGT CAGCTTCGTG CCCAACGACC GCATCGTGAT GGAGAAGAAC GAGCATTTCC ACGGTGCGGC CAATGTGGCC ATCGACCGCG TGGAATGGGT GCCCTTCGAG GACCGCTCGG CCTGTCTGCG CCGGTTCGAG GCGGGCGAGG TGCAGATGTG CACCGACGTT CCGGCCGAAC AGATGGCCTA CATGCGCGAG AACCTGAAGG ACGAGCTGCA TATCGCGCCC TACCTCGGCA CCTACTACCT GCCGGTGAAG GGCGCCGACG GCAGCCCGCT GAAAGACAAG CGGGTGCGGC AGGCGATCTC GATGGTGCTG GATCGTGACT TCATCGCCGA GGAGGTCTGG CAGGAGACGA TGCTGCCCGG CTATTCGATG GTGCCTCCGG GCATCTCGAA CTATGTCGAG ACCCCGCCCG CGCTCGACTA TGCCGACGAG GATCTGCTCG ACCGCGAGGA CAAGGCCAAG GCGCTGCTCG AGGAAGCGGG CGTGGCCGAG GGCAGCCTCA CCGTGCAGCT CTCCTACAAC TCGTCCGAGA ACCACCGGAA CACGATGACG GCCATCGCCG ACATGCTGAA GAACATCGGC ATCAACGCGA CGCTGAACGA GATGGAAGGC ACGAACTACT TCAACTACCT GAAGGAAGGC GGCGCCTACG ACATCGTGCG CGCGGGCTGG ATCGGCGACT ATTCCGACCC GCAGAACTTC CTGTTCCTGT TCGAGGGCGG CGTGCCCTTC AACTATCCGC GCTGGGAGAA TGCCGAATAC GACGCGCTGA TGGACAAGGC GGCCGTCACG CAGGATCTCG GGCAGCGCGC GCAGATCATG GCCGATGCCG AGACGATCCT GCTCGACGAG GTGCCGGCGA TCCCGCTGCT GACTTATTCC TCGCGGGCGC TCGTGTCCGG CAAGGTGCAG GGCTACGCGG ACAACCTGCC CGACGTGCAC CTCACCCGCT GGCTCTCGCT CGCCGAGTAA
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Protein sequence | MTLFSLRAGA CALALMAGTA GMAAAQVTIV RGNDTDPATL DHHLTSTVAE SRIMNDLYEG LVVQDAQAKV VPGVAESWEI SEDGLTYTFK LRDDAKWSNG DPVVAEDFVF ALRRIMTPAT AAVYANILYP IANAEAIATG AKQPEELGVE AVDAHTLKFT LNAPTPYFLE LLTHQSSLPM HRATVEAEGS NFTKPGVMVT NGAYKLVSFV PNDRIVMEKN EHFHGAANVA IDRVEWVPFE DRSACLRRFE AGEVQMCTDV PAEQMAYMRE NLKDELHIAP YLGTYYLPVK GADGSPLKDK RVRQAISMVL DRDFIAEEVW QETMLPGYSM VPPGISNYVE TPPALDYADE DLLDREDKAK ALLEEAGVAE GSLTVQLSYN SSENHRNTMT AIADMLKNIG INATLNEMEG TNYFNYLKEG GAYDIVRAGW IGDYSDPQNF LFLFEGGVPF NYPRWENAEY DALMDKAAVT QDLGQRAQIM ADAETILLDE VPAIPLLTYS SRALVSGKVQ GYADNLPDVH LTRWLSLAE
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