Gene Rsph17029_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0129 
Symbol 
ID4895656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp143652 
End bp145271 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content70% 
IMG OID640110712 
ProductABC transporter related 
Protein accessionYP_001042021 
Protein GI126460907 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG TTCTCGATGT GAAGGGCCTC CGGGTCGCCT TCCAGACCAA TGACGGCGAG 
GTTCAGGCCG TGCGCGGGAT CGACCTCTCG GTGATGCCCG GCGAGACCGT GGCCATCGTG
GGCGAATCCG GCTCGGGCAA GAGCCAGACC ACCATGGCGC TGATGGGGCT TCTGGCGCAG
AACGGCCGGG CCACCGGCTC GGCCCTCTAC CGCGGGCGCG AGCTGATCGG CCTGTCCGAG
CGCGAGCTGA ACAAGGTGCG CGGCGACAAG ATCACCATGA TCTTCCAGGA GCCGATGACC
TCGCTCGACC CGCTCTACCG GATCGGCGAC CAGCTGGCCG AGCCGCTGCG CTTCCACCGC
GGGCTCTCGA AACGCGAGGC GCGGCCCCGG ATCGTCGAGC TTTTGCGCCT CGTGGGCATC
CCCGAGCCCG AGCGGCGGAT CGACAGCTAT CCGCACGAAC TGTCGGGCGG GCAGCGCCAG
CGGGTGATGA TCGCCATGGC GCTCGCCTGC GATCCCGACA TCCTGATCGC CGACGAGCCC
ACCACCGCGC TCGACGTGAC GATTCAGGCG CAGATCCTGA CCCTGCTCGC CGATCTGCAG
AAGCGGCTCG GCATGGCGAT CCTCTTCATC ACCCATGACC TCGGCATCGT GCAGCGCTTC
GCCGACCGGG TCTATGTGAT GCAGGCGGGC GAGGTGGTCG AGACCGGCGA GACCGCGGCG
CTGTTCGAGG CGCCGTCGCA TCCCTATACG CGGATGCTGC TCGATGCCGA GCCCGAGGGG
ACGAAGGCGC CGCCGCCCGA GACGGCGCCG GTGCTGATGG AGGGCCGCAA CGTCGAGGTG
GTCTTCTCGA GCGGCGGCGG CCTCTTCGAG GCGCCGAACA AGCTGCGCGC CGTGGACGGC
GTGTCGGTCC GGCTGCGGCA GGGCCAGACC ATCGGGGTGG TGGGCGAGTC CGGGTCGGGC
AAGTCCACCC TCGGGCGCGC GCTCCTGCGG CTGCTGCCCT CGGCGGGCCT CGTGACCTTC
GAGGGGCGCG AGCTCGCCCG CGACGCGGCC GAGATGCGCC CGCTGCGACG CCGGATGCAG
CTCGTCTTCC AGGATCCGTT CGGCTCGCTC TCGCCGCGGA TGACCGTGGG GCGGATCATC
ACCGAAGGCC TCAAGATCCA CGAGCCGGAC CTTTCCACCC GCGAGCGCGA CCGCCGCGCG
GGCGAGGCGC TGGCCGAGGT GGGCCTCAGC CCCGCGATGC GCAACCGCTA CCCGCACGAG
TTTTCAGGCG GCCAGCGCCA GCGCATCGCC ATCGCCCGGT CGATGATCCT GAAGCCCAGG
GTGATCGTTC TGGACGAGCC GACCTCGGCC CTCGACCGGT CGGTGCAGAA GCAGATCGTG
GACCTGCTGC GCGACCTGCA GGCGCGGCAC GGGCTCTCCT ACCTCTTCAT CAGCCACGAC
CTCGCCGTGG TCCGGGCACT GGCCGACTAT ATCCTCGTGA TGAAGGAGGG CCGCATCGTC
GAGGAGGGCC AGACCGCCGA CATCTTCGAC CGTCCGCAGG AGGCCTACAC CCGGACGCTC
ATGGCCGCCG CGCTCGAGAC GCGGCGCTTT CGCGAGGAGG CGGAACGGAC GGGCGTCTGA
 
Protein sequence
MEPVLDVKGL RVAFQTNDGE VQAVRGIDLS VMPGETVAIV GESGSGKSQT TMALMGLLAQ 
NGRATGSALY RGRELIGLSE RELNKVRGDK ITMIFQEPMT SLDPLYRIGD QLAEPLRFHR
GLSKREARPR IVELLRLVGI PEPERRIDSY PHELSGGQRQ RVMIAMALAC DPDILIADEP
TTALDVTIQA QILTLLADLQ KRLGMAILFI THDLGIVQRF ADRVYVMQAG EVVETGETAA
LFEAPSHPYT RMLLDAEPEG TKAPPPETAP VLMEGRNVEV VFSSGGGLFE APNKLRAVDG
VSVRLRQGQT IGVVGESGSG KSTLGRALLR LLPSAGLVTF EGRELARDAA EMRPLRRRMQ
LVFQDPFGSL SPRMTVGRII TEGLKIHEPD LSTRERDRRA GEALAEVGLS PAMRNRYPHE
FSGGQRQRIA IARSMILKPR VIVLDEPTSA LDRSVQKQIV DLLRDLQARH GLSYLFISHD
LAVVRALADY ILVMKEGRIV EEGQTADIFD RPQEAYTRTL MAAALETRRF REEAERTGV