Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0129 |
Symbol | |
ID | 4895656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 143652 |
End bp | 145271 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640110712 |
Product | ABC transporter related |
Protein accession | YP_001042021 |
Protein GI | 126460907 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCCG TTCTCGATGT GAAGGGCCTC CGGGTCGCCT TCCAGACCAA TGACGGCGAG GTTCAGGCCG TGCGCGGGAT CGACCTCTCG GTGATGCCCG GCGAGACCGT GGCCATCGTG GGCGAATCCG GCTCGGGCAA GAGCCAGACC ACCATGGCGC TGATGGGGCT TCTGGCGCAG AACGGCCGGG CCACCGGCTC GGCCCTCTAC CGCGGGCGCG AGCTGATCGG CCTGTCCGAG CGCGAGCTGA ACAAGGTGCG CGGCGACAAG ATCACCATGA TCTTCCAGGA GCCGATGACC TCGCTCGACC CGCTCTACCG GATCGGCGAC CAGCTGGCCG AGCCGCTGCG CTTCCACCGC GGGCTCTCGA AACGCGAGGC GCGGCCCCGG ATCGTCGAGC TTTTGCGCCT CGTGGGCATC CCCGAGCCCG AGCGGCGGAT CGACAGCTAT CCGCACGAAC TGTCGGGCGG GCAGCGCCAG CGGGTGATGA TCGCCATGGC GCTCGCCTGC GATCCCGACA TCCTGATCGC CGACGAGCCC ACCACCGCGC TCGACGTGAC GATTCAGGCG CAGATCCTGA CCCTGCTCGC CGATCTGCAG AAGCGGCTCG GCATGGCGAT CCTCTTCATC ACCCATGACC TCGGCATCGT GCAGCGCTTC GCCGACCGGG TCTATGTGAT GCAGGCGGGC GAGGTGGTCG AGACCGGCGA GACCGCGGCG CTGTTCGAGG CGCCGTCGCA TCCCTATACG CGGATGCTGC TCGATGCCGA GCCCGAGGGG ACGAAGGCGC CGCCGCCCGA GACGGCGCCG GTGCTGATGG AGGGCCGCAA CGTCGAGGTG GTCTTCTCGA GCGGCGGCGG CCTCTTCGAG GCGCCGAACA AGCTGCGCGC CGTGGACGGC GTGTCGGTCC GGCTGCGGCA GGGCCAGACC ATCGGGGTGG TGGGCGAGTC CGGGTCGGGC AAGTCCACCC TCGGGCGCGC GCTCCTGCGG CTGCTGCCCT CGGCGGGCCT CGTGACCTTC GAGGGGCGCG AGCTCGCCCG CGACGCGGCC GAGATGCGCC CGCTGCGACG CCGGATGCAG CTCGTCTTCC AGGATCCGTT CGGCTCGCTC TCGCCGCGGA TGACCGTGGG GCGGATCATC ACCGAAGGCC TCAAGATCCA CGAGCCGGAC CTTTCCACCC GCGAGCGCGA CCGCCGCGCG GGCGAGGCGC TGGCCGAGGT GGGCCTCAGC CCCGCGATGC GCAACCGCTA CCCGCACGAG TTTTCAGGCG GCCAGCGCCA GCGCATCGCC ATCGCCCGGT CGATGATCCT GAAGCCCAGG GTGATCGTTC TGGACGAGCC GACCTCGGCC CTCGACCGGT CGGTGCAGAA GCAGATCGTG GACCTGCTGC GCGACCTGCA GGCGCGGCAC GGGCTCTCCT ACCTCTTCAT CAGCCACGAC CTCGCCGTGG TCCGGGCACT GGCCGACTAT ATCCTCGTGA TGAAGGAGGG CCGCATCGTC GAGGAGGGCC AGACCGCCGA CATCTTCGAC CGTCCGCAGG AGGCCTACAC CCGGACGCTC ATGGCCGCCG CGCTCGAGAC GCGGCGCTTT CGCGAGGAGG CGGAACGGAC GGGCGTCTGA
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Protein sequence | MEPVLDVKGL RVAFQTNDGE VQAVRGIDLS VMPGETVAIV GESGSGKSQT TMALMGLLAQ NGRATGSALY RGRELIGLSE RELNKVRGDK ITMIFQEPMT SLDPLYRIGD QLAEPLRFHR GLSKREARPR IVELLRLVGI PEPERRIDSY PHELSGGQRQ RVMIAMALAC DPDILIADEP TTALDVTIQA QILTLLADLQ KRLGMAILFI THDLGIVQRF ADRVYVMQAG EVVETGETAA LFEAPSHPYT RMLLDAEPEG TKAPPPETAP VLMEGRNVEV VFSSGGGLFE APNKLRAVDG VSVRLRQGQT IGVVGESGSG KSTLGRALLR LLPSAGLVTF EGRELARDAA EMRPLRRRMQ LVFQDPFGSL SPRMTVGRII TEGLKIHEPD LSTRERDRRA GEALAEVGLS PAMRNRYPHE FSGGQRQRIA IARSMILKPR VIVLDEPTSA LDRSVQKQIV DLLRDLQARH GLSYLFISHD LAVVRALADY ILVMKEGRIV EEGQTADIFD RPQEAYTRTL MAAALETRRF REEAERTGV
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