Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0114 |
Symbol | |
ID | 4895586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 129464 |
End bp | 130609 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640110697 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001042006 |
Protein GI | 126460892 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.112349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CGCTTGCCGG GATCCGGGTC GTCGAACTGG CCCGGATCCT GGCCGGCCCC TGGGCCGGGC AGGTGCTGGC GGACCTCGGC GCGGATGTCG TCAAGGTCGA GGCCCCGGAG GGCGACGATA CCCGCCGCTG GGGTCCGCCC TTCATCGAGC GCGAGGGCGA CCGCTCGGCC GCCTATTTCC ACGCGGCCAA CCGCGGCAAG AGGTCGGTGA CGGCCGATTT CCGCACGCCC GAGGGGCAGG AGACCGTCCG CCGCCTCGTG GCCGATGCCG ATGTGGTGAT CGAGAATTTC AAGGTGGGCG GGCTCGCGAA ATACGGGCTC GACTGGCCGT CTCTGCAGAA GGTGAACCCG CGGCTCGTCT ATTGCTCGAT CACGGGCTTC GGGCAGGACG GCCCCTACGC GCACCGGGCG GGCTACGATT TCATCATCCA GGGCATGGCG GGGCTGATGA GCGTGACCGG CGCGGCCGAG GGCCAGCCGC AGAAGGTGGG CGTGGCGGTG ACCGACATCT TCACCGGGAT CTATGCCGCC ACCGCCATCC TCGCCGCCCT GCACCAGCGC GCGGGCACGG GGCGCGGGCA GCAGGTGGAC ATGGCGCTGA TGGATGTGGC TGCGGGCATC ATGGCCAATC AGGCCATGAA CTACCTCGCC ACCGGCGTCG CGCCGCGCAA GATGGGCAAC GAACATCCGA ACCTCGCGCC CTATGCGGTC TTCGACTGCG CCGATGGCTG GATCATCATC GCCACCGGCA ACGACGCGCA ATATCGCAGG CTCTGCACGC TTCTGGGCCT GCCGGGGCTG GCCACCGCGC CCGCGTTCCT CACCAATGCC GACCGGGTGG CGAACCGGGC CGAGCTGACG CGCGCGTTGA CAGCTGTCAC CTCGGGCTGG CGGAAGGCCG AGCTTCTGGC CGCCTGCGAG GCCGAGGGGG TGCCTGCGGG CCCGATCAAC GACATGGCCG AAGTCTTCGC CGATCCGCAG ATCCGCCATC GCGGCATGCA GATCGCCCCG GACGGCGTGC CGGGCGTGCG CTCTCCCTTC CGCTTCTCCG AGGCGAAGCT GGCCCTCGCC CGCCCCGCCC CGCGGCTCGG CGAGCATCAG GCCGAGGTGC TGGGCGAACC GGCGGATCAG GACTAG
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Protein sequence | MSAPLAGIRV VELARILAGP WAGQVLADLG ADVVKVEAPE GDDTRRWGPP FIEREGDRSA AYFHAANRGK RSVTADFRTP EGQETVRRLV ADADVVIENF KVGGLAKYGL DWPSLQKVNP RLVYCSITGF GQDGPYAHRA GYDFIIQGMA GLMSVTGAAE GQPQKVGVAV TDIFTGIYAA TAILAALHQR AGTGRGQQVD MALMDVAAGI MANQAMNYLA TGVAPRKMGN EHPNLAPYAV FDCADGWIII ATGNDAQYRR LCTLLGLPGL ATAPAFLTNA DRVANRAELT RALTAVTSGW RKAELLAACE AEGVPAGPIN DMAEVFADPQ IRHRGMQIAP DGVPGVRSPF RFSEAKLALA RPAPRLGEHQ AEVLGEPADQ D
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