Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0048 |
Symbol | |
ID | 4896750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 57852 |
End bp | 58664 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640110624 |
Product | NLP/P60 protein |
Protein accession | YP_001041940 |
Protein GI | 126460826 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0780825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCC GGACGACCCC CTGCAGCGGC GAGGTGGCTC ATGTCTCGCT GAAGGGGCAG GTGGCGGCCC CGCGCTTCAC CGATGGCACG CCCGCGCGGA TCGGCCTGCC GGTCGTGGAT CTCCTCGCCC GTCCGGATGG CCCGCGGGAC CGGCAGCTCC TTCTGGGCGA GGATTTCCTC GTGATCGACC GGCGCGAGGG CCATGCCTTC GGCCGCGCCG CCAAGGATGG CTATTGCGGC TGGCTGCCCG AGGCCGCGCT TGCAGCGCCT GAAACGGTCA CCCACCGCGT CGCGGTGCCC GCGACCCATC TCTATCCCGA ACCGCGGGTG CAGGCGCATG AGATCGCCGC CCTCAGCTTC GGCGCGCGGC TGACTGTCAT TGGCGAAGCG CGAAATTTTC TTCAGACGAC AATGGGTTGG GTTCCCGCCT GCCATCTGTG GCCGCTGGAT CGGCTCCATT CCGACCCGGT GGCCGTGGCG CGGTTCTTTC ACGGCACACC CTATCTCTGG GGGGGCAACA GCCGGGCGGG CATCGATTGC TCGGGTCTCG CGCAGGCAGC GCTTCTGGCC TGCGGGATGG ACTGTCCCGG CGACAGTGAC CTGCAGCAGA CGGTCGGCAC TGAGGTTTCC GGCGACCTGC AGGCGGGAGA CCTTCTGTTC TGGAAGGGCC ATGTCGCCAT GGCCATCGAT GCGCAGCGCA TGATCCATGC CACGGGGTAT GTGATGGGGG TGATCGAGGA GGAGACGGAG GCCGCCATCG CCCGGATCGC CGCGGCCGGC GAGGGGCCGG TTCTGGCGCG CCGCCGGCCC TGA
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Protein sequence | MDRRTTPCSG EVAHVSLKGQ VAAPRFTDGT PARIGLPVVD LLARPDGPRD RQLLLGEDFL VIDRREGHAF GRAAKDGYCG WLPEAALAAP ETVTHRVAVP ATHLYPEPRV QAHEIAALSF GARLTVIGEA RNFLQTTMGW VPACHLWPLD RLHSDPVAVA RFFHGTPYLW GGNSRAGIDC SGLAQAALLA CGMDCPGDSD LQQTVGTEVS GDLQAGDLLF WKGHVAMAID AQRMIHATGY VMGVIEEETE AAIARIAAAG EGPVLARRRP
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