Gene Rsph17025_4375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4375 
Symbol 
ID5086557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009432 
Strand
Start bp19014 
End bp19733 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID640485931 
Producttype IV secretion system family protein 
Protein accessionYP_001170525 
Protein GI146280370 
COG category 
COG ID 
TIGRFAM ID[TIGR02791] P-type DNA transfer protein VirB5 


Plasmid Coverage information

Num covering plasmid clones91 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones179 
Fosmid unclonability p-value0.669124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC GCCTCGGCAT CGTCGCCGCT CTCTCGGTCC TTCTCGGGGC GTCCGCCGCC 
AGCGGGCAGG GGGTGCCCGT CATCGACGCC ACCTCGATCT CGAACGCCAA GACGCAGTTC
GCCCAGCAGC TGGCGCAGAT GATCAAGGAG TTCGAGGAGG CGCAGCGGCT CTATTCCGCC
ATCAACGGCG CCACCGGCAT GGGCGAGGTC GTCGCCATGC TGAACGATCC GGACGTGCGC
GAGGTGCTTG GTCCCGACGC GCAGAGGATC GCGGCCTCGT TCGACATCAA CCTCGACGAT
CTGGGCGATC TCGCCGACAC GGCGAAGGCG GTCCATGCCT TTGCCTCGCT CGAGAACGAG
AACATCACGG CCGAGGGCTT CTACCGGAGC GAACTTGACC GGATCAAGAA GCAGGCGGGG
CGCAACACCG CGACCGGCGA GCGGATCGTC AATCTCTCCG ACGACCGACT TGGTGGCCTC
GAGCGGCTCC GCCAGCAGAT CGGCATGGTC GAGACCCAGA AGGAGGTCGA TGCGCTGAAC
ACGCGGATCG CGATTGAGCA GGCCATGCTG CAGAACGACA CCAACCGCAT TCAGGGCCTG
TCGATGCTGC AGGCGGCGCA GGCGCAGGCG GAAGAGCAGC GGCAGGTCGA GCTGGCGGCG
CAGCGCCGGC AGAAAGAGGC GGCCGGCTTC AGCGCCACCT TCGGCGGCAC ATCATTTTGA
 
Protein sequence
MTHRLGIVAA LSVLLGASAA SGQGVPVIDA TSISNAKTQF AQQLAQMIKE FEEAQRLYSA 
INGATGMGEV VAMLNDPDVR EVLGPDAQRI AASFDINLDD LGDLADTAKA VHAFASLENE
NITAEGFYRS ELDRIKKQAG RNTATGERIV NLSDDRLGGL ERLRQQIGMV ETQKEVDALN
TRIAIEQAML QNDTNRIQGL SMLQAAQAQA EEQRQVELAA QRRQKEAAGF SATFGGTSF