Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4358 |
Symbol | |
ID | 5086540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009432 |
Strand | + |
Start bp | 278 |
End bp | 916 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640485914 |
Product | hypothetical protein |
Protein accession | YP_001170508 |
Protein GI | 146280353 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 0.0000234653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 179 |
Fosmid unclonability p-value | 0.657828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTAATGC GGGCCACATT TGGGTTCCTC TTGGTGTTAA TGCAGGATAG GCTAAGCGCC AGCATTGTAT ACAAATCGCC TGTCATGACC GAGAAATCCG TTGTGGTTCA CGCCAGGGTT CCGCCCGAGA TCCGCGCCCG TCTCGAGGGG CTGGCTGCCG AAGCTGGCGT TCATGTGTCG GGTGTCCTGC GTGCCCTGAT CGAAGATGCC GTTCGGGACA CATCCACCCA GAAGGCGCCG CCGCTGCTGT CGAGGGCGCG GCGTGAGGGC AAGGTCACGG TTCGCCTAGC CGCCGATGTT CGCGACCGAC TGGAGCGGGA AGCGAAAGGG CAGGGGGTGT CGCTCTCCAC TTGGGCGGCG GCGGTGATCG GCGCCCGCGC CCGGCACGCG CCCCAGCCAG TCCCGAGTGA ACGCCGAACG ATCCAGGCTG CCTTCCGCCA GTTGCGTGGC CTCGCGGTGA ACGTGAACCA GATCGCCTAT GCGCTGAACC GCGGGGTGCT GACCGGGGCA GCGGCCGAGC TCACCCGCGA GGAGGTCACG GCCCTTCGCC AAGATGTCTC TGCGCTGCGG GATGTTCTTC GCACCTACGC CGCAGGCCGC CTGTCCTTCC AAGCCCCGCA CGGAGACGGC GATGAGTGA
|
Protein sequence | MLMRATFGFL LVLMQDRLSA SIVYKSPVMT EKSVVVHARV PPEIRARLEG LAAEAGVHVS GVLRALIEDA VRDTSTQKAP PLLSRARREG KVTVRLAADV RDRLEREAKG QGVSLSTWAA AVIGARARHA PQPVPSERRT IQAAFRQLRG LAVNVNQIAY ALNRGVLTGA AAELTREEVT ALRQDVSALR DVLRTYAAGR LSFQAPHGDG DE
|
| |