Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4246 |
Symbol | |
ID | 5086427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | - |
Start bp | 5264 |
End bp | 6952 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485807 |
Product | hypothetical protein |
Protein accession | YP_001170401 |
Protein GI | 146280245 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.2464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.120296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCA AGATCAAGCT CGCCCTCGCC TTTCTGTTCG TCTTCACGCT CTTCCTGATC GCAACCGGCC TGTCGCTCCA GCGCCTGCAG GCGATGAATG CCCGCATCGA GACTCTGGCG CAGGTCGAGT TCCCCGCTGC GGTTCTTGTC GAGCGGATGG TGGCCGAGCA GCAGCGGGAA TCCGCAGCAC TCCGGGATCA CATGGTGGCG ACCGAGGATG CAGAGCTCGA GAAGTTCGAA AAGGCGGTCT TTGCCGCCCG AAATGAGCGG GACTCCCTCC TCGCGGAGCT TCAGGCGCTG GTATCCAGTG AGGCCGAGCG GGCGAAGCTT GTCCGGATCG GCGAACTGAA CATCGAGGGG AACAGGCGCA ACGACGCCGC GCTGGAGCGG TCGAAGCTGT TCGACCTCGG CGGGGCCGCA CATGTCCTGC ACGACCCGTC CGCAAGCGGC AGCCGTGCCG AAAGGTCGCG CCTCCTGAGC GAGTTGCGAG AGCATCAGGC GGCCGACGTT GCCGCGGCTG TCAACGCGTC TCGACAGACC TACAGCACGG CGCTGCGCGA CCTGCTGATC GCGGTGGGGA CGGCCATCGT GACCGGGGCG ATCGCGGCCT TCCTGATCAC CCGCTCGATC GTGCGTGGCC TCCGCGAGGC GCTGGCTCTG AGCGAACGGG TAGCCAACGG CGACCTGATC GCCACTTCGA ACCTACGCGG CCGCGACGAG ATCGGCCGGC TGCTGACCGC GAACAACCGC ATGATCCTGA AACTGCGCGA GGTGGTCGGA ACCGTCGGCG CATCGGTGCA GCAGGTGACC GCCAACAGTT CTGCGATGGC AGCGACGTCG GAAGAACTGT CGCAGGGCGC GCAGGAACAG GCCTCGGCCA CCGAGCAGGC CTCGGCCTCT GTCGAGCAGA TGGCGGCCAA CATCAAGCAG ACAGCGGACA ATGCCGGTGC GACCGAGATC ATGGCCCGGA AATCGGCTGA ACGGGCGCGC GCCTCGGGGA CGGCGGTGGC CGAAGCGGTC TCCGCCATGC AGGCGATCGC AGAGCGGATC AACGTCGTCC AGGACATCGC ACGTCAGACC GACCTTCTGG CGCTGAACGC CGCGGTCGAG GCCGCACGCG CCGGCGAGCA TGGGCGCGGC TTCGCGGTCG TGGCCTCCGA GGTCCGAAAG CTGGCCGAGC GCAGTCAGAC CGCCGCGAGT GAAATCTCGG CTCTCTCGAC GCGCACGGTC CAGACCGCGA CCGCTGCCGG CCAGATGCTC GGCGAACTCG TGCCCGACAT CGAGAGCACC TCCAACCTCG TGAGCGGCAT CTCGGTGGCC TCGCGCGAAT TGGCGCTGGG AGCGCAGCAG GTGGCCACGG CCATCCAGCA GCTTGATACG GTCACGCAGC AGACGACATC GGCATCAATT GAACTGGCGT CCGGGGCGGA GGTCCTCTCC GGACAGTCCG AAGAACTGCA GCGAACGATG ACCCATTTCC GTCTGGAGGC GACAACCGCC ACCTCCAAGG CACCGGCAGC AGGGTCGGCC GTGCATGTCG AGGGTCCGGC TCGATCCCCT CGCGGGGCCA CCCCGAACCT CAAGGCAGCA CCCAAAGCGA AAGCACCCGG AGGCTTCGCC TTGGACATGG AAAAAGGTGC GTCCGACGAC ATGCTCGACA AGGATTTCCG CCGCCATGAC GCCGCATGA
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Protein sequence | MSIKIKLALA FLFVFTLFLI ATGLSLQRLQ AMNARIETLA QVEFPAAVLV ERMVAEQQRE SAALRDHMVA TEDAELEKFE KAVFAARNER DSLLAELQAL VSSEAERAKL VRIGELNIEG NRRNDAALER SKLFDLGGAA HVLHDPSASG SRAERSRLLS ELREHQAADV AAAVNASRQT YSTALRDLLI AVGTAIVTGA IAAFLITRSI VRGLREALAL SERVANGDLI ATSNLRGRDE IGRLLTANNR MILKLREVVG TVGASVQQVT ANSSAMAATS EELSQGAQEQ ASATEQASAS VEQMAANIKQ TADNAGATEI MARKSAERAR ASGTAVAEAV SAMQAIAERI NVVQDIARQT DLLALNAAVE AARAGEHGRG FAVVASEVRK LAERSQTAAS EISALSTRTV QTATAAGQML GELVPDIEST SNLVSGISVA SRELALGAQQ VATAIQQLDT VTQQTTSASI ELASGAEVLS GQSEELQRTM THFRLEATTA TSKAPAAGSA VHVEGPARSP RGATPNLKAA PKAKAPGGFA LDMEKGASDD MLDKDFRRHD AA
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