| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4245 |
|---|
| Symbol | |
|---|
| ID | 5086426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009431 |
|---|
| Strand | - |
|---|
| Start bp | 4321 |
|---|
| End bp | 5172 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640485806 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170400 |
|---|
| Protein GI | 146280244 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.317932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.160972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGCCG CGGGGGACAT AACCGAATTC CGCCTCGGTC TCGCTGGGGG TGAGTCCCCC
GAGGCGGCCG TCGTTGCAAA CGAGTGTTAC CGGGCGAAGC TCGAGGAGGC GCTCGGGGTT
CCGGTACGGC TCGTGACCAG CCCCACCTAT GATGGCGTCA TCGACGGGTT CCTCAAGGGC
GCGGTCGACA TGGCCTGGCT CGGGGCTTCG TCCTTCGCCA AGATCCATCT GTCCAACCCC
GATGCGGTGG ACGTCACCCT GACCAAGCAG AACAAGTCCG GGCTGACCGG ATATTTCTCC
TATGCCTTTG CACGCAAGGA CTCGGGCATC CGGTCGATGG AGGATGCCCG CGGCAGGACC
TTCGCCTTCG GGGAGCCGGA TTCGACCTCG GGCTACCTGA TCCCCGCGGC GGAACTCTCG
GCGAAGTATG GGGATCTCTC GCGTTTCTTT GCCGCCACCC CCTTTTCGGG CGGGCATGAG
AAGACGATCG TAGGTGTAGC TCAGGGTCAA TACGACGCCG GGGTGAGTTC CGGCGATGGT
GTGGGTTCCT GGGACGAGGG GTTCAGTTCG GGGCCGTTGC GCAAGGCCGT GAGCGCCGGG
CTGGTCCGGA TGTCGGATCT CGTGATGCTC TGGCAGTCGC GCATGATCCC CGAGGGACCG
CTGGTAATCA GCCGCAACGT TCCGCAGCCC GTCCGTGACA CCGTGGTTCC CCTGACGGCA
CGGCTCCATG AGACGGATGC CGCCTGCGCA CGGCTGGTGG CCGGCGGTGA GGCGAAGGAC
TTCGTGCCGA CGACCATCCG CGCCTACAGC GGGATCATAG AGGCCCGAAA GCTGCAGGAG
GCGAGTCCCT GA
|
|---|
| Protein sequence | MLAAGDITEF RLGLAGGESP EAAVVANECY RAKLEEALGV PVRLVTSPTY DGVIDGFLKG
AVDMAWLGAS SFAKIHLSNP DAVDVTLTKQ NKSGLTGYFS YAFARKDSGI RSMEDARGRT
FAFGEPDSTS GYLIPAAELS AKYGDLSRFF AATPFSGGHE KTIVGVAQGQ YDAGVSSGDG
VGSWDEGFSS GPLRKAVSAG LVRMSDLVML WQSRMIPEGP LVISRNVPQP VRDTVVPLTA
RLHETDAACA RLVAGGEAKD FVPTTIRAYS GIIEARKLQE ASP
|
|---|
| |