| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4187 |
|---|
| Symbol | |
|---|
| ID | 5086359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009430 |
|---|
| Strand | + |
|---|
| Start bp | 233147 |
|---|
| End bp | 233554 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640485749 |
|---|
| Product | DNA replication protein-like protein |
|---|
| Protein accession | YP_001170343 |
|---|
| Protein GI | 146280186 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.49294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCT ACATGCTCGA CACGAACATC CTGATCTACA CGATCAGGAA CCGGCCTGGC
GAGGTGAGGG CAAAATTCGA GGCCCATCAC GGGACGATGT GCATCTCGAC CGTAACCGCG
ATGGAACTGA TCTACGGCGC GCAGAAATCG CAGGCCGTCG AGCGCAACAT GGCCGCGGTC
GAGGGACTTC TTGCGCGCCT CGACATCCTG GACCTCGACC TGGCGGCTGC CCAGCATGCC
GGGGAAATCC GGGCGCAGTT GGCGAGGACA GGGACGCCCA TTGGGCCGTT CGACGTGATG
ATCGCCGGAC ACGCGCGATC GAGGGGCTTG GTCCTCGTGA GCAACAACAC ACGGGAATTC
GAGCGCGTCG ACGGCCTGAG GCTGGAGAAC TGGGTCCAGA CGTCCTGA
|
|---|
| Protein sequence | MLRYMLDTNI LIYTIRNRPG EVRAKFEAHH GTMCISTVTA MELIYGAQKS QAVERNMAAV
EGLLARLDIL DLDLAAAQHA GEIRAQLART GTPIGPFDVM IAGHARSRGL VLVSNNTREF
ERVDGLRLEN WVQTS
|
|---|
| |