Gene Rsph17025_4175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4175 
Symbol 
ID5086347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp218694 
End bp219782 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID640485737 
Producthypothetical protein 
Protein accessionYP_001170331 
Protein GI146280174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3405] Endoglucanase Y 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA GGCACTTCAT GGCGTCTCTG CTCGGCACCC TCGCGGCAGG ACGGGCTTTC 
GGCGGCTTCG CACAGGAGGG AGCCGCCTTC GTCCTGCCCG CCGATCATCC GCTGCAGCCG
GCCTGGCAAG CCTGGAAAAG CCTCTGCCTG CAGGAGGACG GCCGGATCGT CGATGCGCCC
CAAAGCGGGG CCAGCCATTC CGAAGGCCAG GGTTACGGTC TGCGGCTGGC CGTGGCCTTC
GGGGACGAGG AGGCGTTCCG CAGGATCTTC GAATGGAGCG AAAGCCATCT GGCCCTGCGC
GAGGACGGGC TGCTGAGCTG GCGCTACCTG CCCGAAGCCG GCGATCCGGT TCCCGACCGC
AACAATGCCT CCGACGGCGA CCTCTTCTAC GGCTGGGCGC TGATCCAGGG CGCGATGGCC
TGGAACGAAC CCCTCTTCGC CGACCGGGCC CGGATGATCG GCACGGCGCT CGCGCGCAGC
TGCCTGGCCG ATCATCCCGA CGGCTCGGGT CGCCGGTATC TTCTGCCGGC CGCCTATGGG
TTCACCAGCG ACAGGGCCAT CACGCTCAAC CTGTCCTACT GCATGCCCCG CGCGATGCGC
GAACTGGGCG CCTTCGCCGA AGCCCCCGCC CTCGTCACGG CGGCGCAGGA CGGTCTCGAC
CTGATGAACG GGATCGCCGG ATCAGGCCTT CTGCCCGACT GGCTGCAGCT GACGCCCGAG
GGGCGCACTC CCGCGCCCGG CCTGCCCGAC CAGAGCGGCT ACGAGGCGCT GCGCATTCCG
CTCTACCTCT GCTGGTCAGG CATGACCGAC ACGCCCGCCC AGCAGCGCTT CCGCGAGATG
CACCGCCAGG CCGCGGCCCG GGATCGGGGC ACCGCCACGG TCTTCGATCC GGAGACCGGC
CGGATCCGGG AGAGCAGCGA CGAGGTCGGC TACCGGGCTC TCGTGGCTCT CAACGACTGT
GTCCTGTCAC GGACCGCAGG ATCCGCCATG CCGGATTTCG ACGCCGCCCA GGTCTATTTC
CCCGCCACGC TCCATCTGAT GGCGCTGGTC GCCCAAGCCG AGTTCTTCCC CAAATGCCTG
CCCGTCTGA
 
Protein sequence
MKRRHFMASL LGTLAAGRAF GGFAQEGAAF VLPADHPLQP AWQAWKSLCL QEDGRIVDAP 
QSGASHSEGQ GYGLRLAVAF GDEEAFRRIF EWSESHLALR EDGLLSWRYL PEAGDPVPDR
NNASDGDLFY GWALIQGAMA WNEPLFADRA RMIGTALARS CLADHPDGSG RRYLLPAAYG
FTSDRAITLN LSYCMPRAMR ELGAFAEAPA LVTAAQDGLD LMNGIAGSGL LPDWLQLTPE
GRTPAPGLPD QSGYEALRIP LYLCWSGMTD TPAQQRFREM HRQAAARDRG TATVFDPETG
RIRESSDEVG YRALVALNDC VLSRTAGSAM PDFDAAQVYF PATLHLMALV AQAEFFPKCL
PV