Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4173 |
Symbol | |
ID | 5086345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | + |
Start bp | 214172 |
End bp | 216508 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485735 |
Product | hypothetical protein |
Protein accession | YP_001170329 |
Protein GI | 146280172 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03030] cellulose synthase catalytic subunit (UDP-forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.703833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCCC TGGTGGTGTT GCTGAGCGTT CCCTCCGATA CGCTCGCCCA GGGGCTGTTC GGCATCACCA CGATCCTGAT CGTGGCGCTT CTGAAGCCTT TCACCTGGCG CTCCACGCCG CTCCGCTTCC TGATGCTGGC GACCGCCGGC ATGGTCGTGA TGCGCTACTG GATGTGGCGG CTGTTCGAGA CCCTGCCCTC CTGGGAGACG CCCCTGTCGC TGACGGCGGC CGGGATGCTC TTTGCGGTCG AGACCTATGC GATCGCGCTC TTCTTTCTCA ATGCCCTCCT GCTTGCGGAT CCGCTGAAGC GGGGCCTGCC CGAACAGGTA CCGTCCGAGC GGCTGCCCAC GGTCGACATC CTCGTGCCCT CCTACAACGA GCCCGTCGAT CTGCTTGCGG TGACGCTCGC CGCGGCCAGG AACATCCGTT ACCCGCCGCA TCTGCTCAGG GTCGTGCTCT GCGATGATGG CGGCACCGAC CAGAAATGCG CCTCCTCCGA CCCCGAAGTG GCCCGTGCCG CCCAGGAGCG GCGCCGGGTC CTGCAGGCGC TTTGCGAGCG GCTGGGGGTG AGCTATCTCA CCCGCGAGCG CAATGTGAGC GCCAAGGCCG GCAATCTGAA TGCGGCCCTC GAGCGAACCG GGGGGGAGTT CGTGGCGGTC TTCGATGCCG ACCACATTCC CTCGAGCGAC TTCCTGGCCC GCACCGTGGG CTTCCTGGTC AAGGATCCCA GGCTCTTTCT GGTCCAGACG CCGCATTTCT TCATCAACAG GGATCCGATC CAGCGCAACC TCGGCCTGCC GGCCTCCTGC CCGGCCGAGA ACGAGATGTT CTATGCGCTC ATCCAGCGCG GCCTCGACCG CTGGGACGGG GCCTTCTTCT GCGGCTCGGC GGCCCTTCTG CGCCGTACGG CGCTCGAGGA GGTGGGGGGC TTTTCCGGCA AGACCATCAC CGAGGATGCC GAGACCGCGC TCGACATCCA TGCGCGGGGC TGGAACAGCC TCTATGTCGA CCGGGCCCTG ATCGCGGGGC TGCAGCCCGA GACCTTTTCC TCCTTCATCC GGCAGCGGGG CCGCTGGGCG GTCGGGATGA TGCAGATCCT GCGGCTGAAG AACCCGATCT TCCGCCCCGG CCTGAGCCTC GCGCAGCGGC TGTGCTACTA CAATTCGATC AGCTACTGGT TCTTCCCGTT GGTCCGGCTC GTCTTCCTGC TCTCGCCGCT GCTCTATCTC TTCTTCGGGT TGCAAATCTT CGTCGCCACC TTCGAGGAGG CCCTCGTCTA CACGCTGACC TATCTGGTGG TCAGCTTCCT CGTGCAGAAC GCGCTCTTTT CGCGCGTGCG CTGGCCGCTG ATCTCCGAGA TCTACGAGAT TGCCCAGACC CCCTATCTGC TGCGCGCCAC GCTGGGGGCC CTGCTGCGCC CGAAAGGGTT CCGCTTCGAG GTGACGGCCA AGGACGAGAC CGTGGCCGAC AGTTTCCTCT CCCCGATCTA CAGGCCTCTT CTGGCCCTCT TCCTGCTGAT GGCCGCGGGA GTCGCCGCGG CGGGGCTGCG CTGGTTCCTC TTGCCCGACG ACCGCCAGGT GGTGCTGCTC GTCGGAGGCT GGGCGCTCTT CAACTTCCTG ATCGCCGGGC TCAGCCTGCG CGCGGTCGTC GAGCAGCGCC AGCGCCGTGT GGCGCCCAGG GTCGATCTGA ACGTGAAGGC GATCCTGGTG CCGGGCGAAG GCGAGACCCC TCTCGAGGTC GAGGTGGCGG ACGCCTCGAC CTATGGCGCA CGCCTGCGCC TGCCCGATGC CGCCCGCCCG GGGCTGCGCC TCACGATCGG ACAGGCTGTG GCGTTCAAGC CGGAGATCGC GCTCCTGCCG CAGGTCAGCC GCATGATCCG GTGCGAACTG CGCTCCCTTC AGCACGAGGG CCCCGACCTG TTTCTCGGGC TGCGTTTCCT GCCGGACCAG GACCCGGCCG CCCGGGAAAC GGTGGCCTGC CTTGTCTTCT CCGATTCGAG GATCTGGGAC CGAATGCGCC GCAGGGCCTT CTCGGGACGC GGGCTCGTGC CGGGACTGGG ATTTGTCGCC TGGCATGCGG CAACAACCAT TCCGCGCACC GCCTACGACC TGGTCCGGCT GTCGCGGACG GTCCCCGAGG AGGAGGAGAC GGGCAAGGAC GAAAGTCCCG CGCCCCATAT CCTGGCCTTC GGCGGAGAAC TGGCCGCACC GATCCTTCCG GTGCCGGACA CGGGCCGGAA AGCGCGTGGC GCACGCAAAC GGCGGGCAGA GGGCCTGTCG GGTCAGGACC TGGAACCTGC CGGCGAAAGC CCGGCCGCTG GCTGGACCGG AGGATGA
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Protein sequence | MLPLVVLLSV PSDTLAQGLF GITTILIVAL LKPFTWRSTP LRFLMLATAG MVVMRYWMWR LFETLPSWET PLSLTAAGML FAVETYAIAL FFLNALLLAD PLKRGLPEQV PSERLPTVDI LVPSYNEPVD LLAVTLAAAR NIRYPPHLLR VVLCDDGGTD QKCASSDPEV ARAAQERRRV LQALCERLGV SYLTRERNVS AKAGNLNAAL ERTGGEFVAV FDADHIPSSD FLARTVGFLV KDPRLFLVQT PHFFINRDPI QRNLGLPASC PAENEMFYAL IQRGLDRWDG AFFCGSAALL RRTALEEVGG FSGKTITEDA ETALDIHARG WNSLYVDRAL IAGLQPETFS SFIRQRGRWA VGMMQILRLK NPIFRPGLSL AQRLCYYNSI SYWFFPLVRL VFLLSPLLYL FFGLQIFVAT FEEALVYTLT YLVVSFLVQN ALFSRVRWPL ISEIYEIAQT PYLLRATLGA LLRPKGFRFE VTAKDETVAD SFLSPIYRPL LALFLLMAAG VAAAGLRWFL LPDDRQVVLL VGGWALFNFL IAGLSLRAVV EQRQRRVAPR VDLNVKAILV PGEGETPLEV EVADASTYGA RLRLPDAARP GLRLTIGQAV AFKPEIALLP QVSRMIRCEL RSLQHEGPDL FLGLRFLPDQ DPAARETVAC LVFSDSRIWD RMRRRAFSGR GLVPGLGFVA WHAATTIPRT AYDLVRLSRT VPEEEETGKD ESPAPHILAF GGELAAPILP VPDTGRKARG ARKRRAEGLS GQDLEPAGES PAAGWTGG
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