Gene Rsph17025_4063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4063 
SymbolrbcL 
ID5086236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp107250 
End bp108671 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content66% 
IMG OID640485626 
Productribulose bisophosphate carboxylase 
Protein accessionYP_001170220 
Protein GI146280063 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.134131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA AGACCTATGA CGCCGGAGTG AAGGACTATC GCTCCATCTA CTGGGAGCCG 
CAGTATCAGG TGAAGGACAG CGACATCCTC GCCGTCTTCA AGGTGGTGCC GCAGCCCGGC
GTGAGCCGCG AGGAGGCCGC CGCCGCCGTC GCCGCCGAAA GCTCGACCGC CACCTGGACG
ACGGTCTGGA CCGACCTTCT GACCGACCTC GACTATTACA AGGGCCGCGC CTACGCGATC
GAGGACGTGC CGGGCAGCGA CGAGGCCTTC TACGCCTTCA TCGCCTATCC GATGGACCTG
TTCGAGGAAG GCTCGGTCGT CAACGTCTTC ACCTCGCTCG TCGGCAACGT CTTCGGCTTC
AAGGCGGTGC GCGCCCTGCG GCTGGAGGAT GTGCGCTTCC CGCTGTGGTT CGTGATGACC
TGCCCCGGCG CGCCGCACGG GATGAAGGTC GAACGCGACC TGCTGGACAA GTACGGCCGC
CCGCTTCTGG GCTGCACGAT CAAGCCGAAG CTGGGCCTGT CGGCCAAGAA CTACGGCCGC
GCGGTCTATG AGTGCCTGCG CGGCGGCCTC GACTTCACCA AGGACGACGA GAACGTCAAC
TCGCAGCCCT TCCTGCGCTG GCGCGACCGC TTCCTGTTCT GCCAGGAGGC GATCGAGAAG
GCCGAGGCCG AGACCGGCGA GCGCAAGGGC CACTACATGA ACGTGACCGC CGGCACGATG
GAAGAGATCT ACGAGCGCGC CGAGTTCGCG AAGGAGATCG GTACGCCCAT CATCATGTCG
GACTATCTGA CGGTGGGCTG GTCGGCGCAC ACGAGCCTCT CGCGCTGGTG CCGCAAGAAC
GGGATGCTGC TGCATGTCCA CCGCGCGATG CATGCGGTGA TGGACCGCAA CCCGAACCAC
GGCATCAACT TCCGGGTGCT GGCCAAGATC CTTCGGCTGA TGGGGGGCGA TCACCTCCAT
TCCGGCACCG TCGTCGGCAA GCTGGAAGGC GACCGGGAGG CCACGATCGG CTGGATCAAC
CTGCTGCGCG ACCGCTTCAT CAAGGCCGAC CGTTCCCGCG GGATCTTCTT CGATCAGGAC
TGGGGGCCGC AGCCCGGCCT GTTCCCGGTC GCCTCGGGCG GCATCCATGT CTGGCACATG
CCGGCGCTGG TCTCGATCTT CGGCAATGAT TCGGTACTGC AGTTCGGCGG CGGGACGCTC
GGCCACCCCT GGGGCAACGC CGCGGGCGCC TGCGCCAACC GGTTCGCGCT GGAAGCCTGC
GTGCAGGCCC GCAACGACGG CCGCAACCTC GAGAAGGAGG GCAAGGAGAT CCTGACCAAG
GCCGCCCAGA CCAGCCCCGA GCTGCGCATG GCGATGGAGA CCTGGAAGGA AGTGCGATTC
GAGTTCGACA CCGTCGACAA GCTCGACGTG CAGCACCGCT GA
 
Protein sequence
MAAKTYDAGV KDYRSIYWEP QYQVKDSDIL AVFKVVPQPG VSREEAAAAV AAESSTATWT 
TVWTDLLTDL DYYKGRAYAI EDVPGSDEAF YAFIAYPMDL FEEGSVVNVF TSLVGNVFGF
KAVRALRLED VRFPLWFVMT CPGAPHGMKV ERDLLDKYGR PLLGCTIKPK LGLSAKNYGR
AVYECLRGGL DFTKDDENVN SQPFLRWRDR FLFCQEAIEK AEAETGERKG HYMNVTAGTM
EEIYERAEFA KEIGTPIIMS DYLTVGWSAH TSLSRWCRKN GMLLHVHRAM HAVMDRNPNH
GINFRVLAKI LRLMGGDHLH SGTVVGKLEG DREATIGWIN LLRDRFIKAD RSRGIFFDQD
WGPQPGLFPV ASGGIHVWHM PALVSIFGND SVLQFGGGTL GHPWGNAAGA CANRFALEAC
VQARNDGRNL EKEGKEILTK AAQTSPELRM AMETWKEVRF EFDTVDKLDV QHR