| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4057 |
|---|
| Symbol | |
|---|
| ID | 5086230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009430 |
|---|
| Strand | + |
|---|
| Start bp | 100711 |
|---|
| End bp | 101910 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640485620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170214 |
|---|
| Protein GI | 146280057 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.058101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.267304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGA TCCTCGGCCT TGCGCTGCGC GACCTGTGGC GGGACTGGGC GCGGCTGGTC
TGCAACATCG CCGTGATGGC GGGCGTCCTC GTGCCGCTCC TCGTGCTGTT CGGGGTGCGC
AACGGCGTCT ATGAGGCGCT GCTGGGCCAG CTCCTGCGCA ATCCGGCGGC GCTGCAGATC
GACACGCGCG GCAATTCCGC CTTCACTCCG GCAGATGCCG AGGAGGTCCG CGGCTGGCCC
GAGACCGCCT TCGTCACGCT GAAGACCCGG AGCCTCTTCG ACTATGTCAA CGTCCGGCCC
GCGGGACAGC CCGCGGTGCG CGAGGCGGTC GCGGTGCCGA CGGGGGCGGG CGATCCGATG
CTGGCGCCGC TGCCGGGCCT CGGGGCGGAC GAGATCGCGG TCTCGGCGCC GCTGGCCGCG
CAGCTCGGCC TCGGGCCGGG GGACGCGGTC GAGCTGGTGA CCCAGGCGCC CGAGAGGCCG
CGCCAGCTGG TCCTGGCCCG CCGGATCGGG ATGATCCTGC CCGAGGCGCG CGCCGCGGGG
CGGGCGGTGC TGGCCGATCT CGGGACGCTC GACCTGATCG AGGCCTTCTA CGACGAATAT
GCCCTGCCCG AGCACGGGAT CGCGACGGGC CGCCCGCTCG CGGGGCGGGT CGCCGATTAC
GAGGGGATGC GCGCCTATGC CGCCTCGCTC GAGGCGCTGG CGCCGCTGCA GGCGCGGATG
GAGGCGCGGT TCGGCGTGGC GACCGAGGCG CAGACGGCCC GGGTGACGGG GGTGCTGGGC
CTCGGGCGGA ACCTCGGCCT TGCGCTTGCC CTGACGGCGG TGGTGGCGGG GACGGGGCTG
GCGGCGGCGC TCGTCTTCGG CTTCTGGGCC GAGGTGGCGC GCAAGCGGCA CATGCTGGCG
GGCCTTGGCC TGATCGGCCT GCCGCCGGCG GCGCTGGGGC TCATTCCGAT GGTGCAGGCG
CTGGTGACGG CCCTCTTGGG CCTCGCGGTC TCCTTCGCGC TCTTCGCGGT GGCGGGGGCG
GTGGCCGAGC GCCTCTTCGC CAGCGGTCTG ACCGAGGAGG GCGGCCTCGT GCGGCTGGCG
CCCGGGCAGG GGCTTGCCAT CGCGGGCGGG GTGGTGATCC TCGTGACGGC CTCGGCGCTG
GCGGCCGCGC GGGCGGCGCT GCGGACCGAT CCGGCCGTCG TGCTGCGCGA GGCGCCATGA
|
|---|
| Protein sequence | MRLILGLALR DLWRDWARLV CNIAVMAGVL VPLLVLFGVR NGVYEALLGQ LLRNPAALQI
DTRGNSAFTP ADAEEVRGWP ETAFVTLKTR SLFDYVNVRP AGQPAVREAV AVPTGAGDPM
LAPLPGLGAD EIAVSAPLAA QLGLGPGDAV ELVTQAPERP RQLVLARRIG MILPEARAAG
RAVLADLGTL DLIEAFYDEY ALPEHGIATG RPLAGRVADY EGMRAYAASL EALAPLQARM
EARFGVATEA QTARVTGVLG LGRNLGLALA LTAVVAGTGL AAALVFGFWA EVARKRHMLA
GLGLIGLPPA ALGLIPMVQA LVTALLGLAV SFALFAVAGA VAERLFASGL TEEGGLVRLA
PGQGLAIAGG VVILVTASAL AAARAALRTD PAVVLREAP
|
|---|
| |