Gene Rsph17025_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4000 
Symbol 
ID5086175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp27188 
End bp28339 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content62% 
IMG OID640485559 
Producthypothetical protein 
Protein accessionYP_001170159 
Protein GI146280002 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA GAATCGTCAT GGTCGGTGCC GGACTCTCGG GTGCGGTGAT CGGGCGCATG 
CTGGCCGAGG CGGGCAATGA CATCACCGTG ATCGACAGCC GGAGCCACAT CGGCGGCAAC
TGCTACACGG AACGCGATGG CGAGACGGAC GTGATGGTCC ATGTCTACGG GCCTCACATC
TTCCACACGG ACGACGAGGA AGTGTGGAAC TACGTCAACC GCTTCACCAC CTTCCTGCCC
TACAAGAACC GGGTGAAGTC CACTGTCGGG GGGCAGGTCT ACTCGCTGCC GATCAACCTG
CACACGATCA ACCAGTTCTT CGGCAAGGCG CTGCGGCCGG ACGAGGCCCG AACCTTCATT
GCAGCGCAGG CCGATCGCTC GATCACGGAT CCGCAGAGCT TCGAGGATCA GGCGCTGGCC
TTCATCGGGC GCGACCTCTA CGAGGCCTTC TTCAAGGGCT ATACCGAGAA GCAGTGGGGC
TGCTTGCCCA CCGCCCTGCC TGCGTCGATC CTCAAACGCC TGCCGGTGCG CTTCAACTAT
GACGACAACT ACTTCGCTCA CCGGTTCCAG GGGATGCCCG AGCAAGGCTA CACCCCGATG
ATCGCGGCGA TCCTCGACCA CCCTAACATC GACATCCGGC TCGACACCGT CTTCGATCCT
GCGACGGCCG CGGAATGGGA CCATGTCTTC TGGTCGGGCC CGCTCGACGG TTTCTTCGGC
TATCGCCTGG GCCGGCTCGG CTATCGAACA CTCGACTTCA AGACCTTCCG CCATGAGGGC
GACTATCAAG GCTGCGCCGT GATGAACTAT GGCGAGAGCA CGGTTCCCTA TACACGCATC
ACCGAGCACA AGCATTTCGC ACCCTGGGAG AGCCATGAAG GCTCCGTCCT CTACGAGGAA
TACAGCCGCG CCTGCGGGCC GGAGGACATT CCCTACTACC CGATCCGCCT CGTCGAGGAG
AAGGCGCTTC TGGCCGATTA TGTCGCCGAG GCCCAGAAGA CCTCGAACGT CACCTTCGTT
GGCCGGCTGG GTACCTATCG CTACCTGGAC ATGGATGTGA CCATTCGCGA GGCGCTCGAC
TGCGGCCGCG CCTATCTGAA GGCGCAGGAG AACGGAGCGA CCATGCCGGC CTTCGCCGTG
GACCCTCTGT GA
 
Protein sequence
MGKRIVMVGA GLSGAVIGRM LAEAGNDITV IDSRSHIGGN CYTERDGETD VMVHVYGPHI 
FHTDDEEVWN YVNRFTTFLP YKNRVKSTVG GQVYSLPINL HTINQFFGKA LRPDEARTFI
AAQADRSITD PQSFEDQALA FIGRDLYEAF FKGYTEKQWG CLPTALPASI LKRLPVRFNY
DDNYFAHRFQ GMPEQGYTPM IAAILDHPNI DIRLDTVFDP ATAAEWDHVF WSGPLDGFFG
YRLGRLGYRT LDFKTFRHEG DYQGCAVMNY GESTVPYTRI TEHKHFAPWE SHEGSVLYEE
YSRACGPEDI PYYPIRLVEE KALLADYVAE AQKTSNVTFV GRLGTYRYLD MDVTIREALD
CGRAYLKAQE NGATMPAFAV DPL