| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3992 |
|---|
| Symbol | |
|---|
| ID | 5086167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009430 |
|---|
| Strand | + |
|---|
| Start bp | 16952 |
|---|
| End bp | 17620 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640485551 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170151 |
|---|
| Protein GI | 146279994 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0212723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.240868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTC CGGGATTTCT CCGCCGCTTC TGGGCGATCG CCACCTCCCC CTCGAGCTTT
CTCAGCGTGG GGTTCCTGAC GCTGGGCGGC TTTGTCGGCG GCGTGCTGTT CTGGGGCGGG
TTCAACACCG CGCTCGAGGC CACCAACACT GAGGCCTTCT GCACCTCGTG CCACGAGATG
CAGGCCAATG TCTTCGAGGA GCTGACCCGC ACGGTGCATT ACACCAACCG CTCGGGCGTG
CGCGCGGGCT GCCCGGACTG CCACGTCCCG CACGAATGGA CCGACAAGAT CGCGCGCAAG
ATGCAGGCCT CGAAGGAGGT CTGGGGGCAT CTCTTCGGCA CGATCGACAC GCGGCGCAAG
TTCCTCGACC AGCGGCTCCG GCTGGCCGAG CACGAATGGG CGCGGCTGAA GGCCAATGAC
TCGCTCGAAT GCCGCAACTG CCATTCCGAG GTGGCGATGG ACTTCGCCCG CCAGACCGAC
CGGGCGGGGA TGATCCACAC GCAATATCTG ATCCAGACCG AGGGCTACAC CTGCATCGAC
TGCCACAAGG GCATCGCGCA TGAACTGCCC GACATGCGCG GCATCGATCC GGGCTGGCTG
CCGCCGGCCG AGCTGCGCGC GGCCCTGGCG CCCGACCTCG AGGGCCTGCG GCAGCATCTG
GCGGAATAG
|
|---|
| Protein sequence | MRLPGFLRRF WAIATSPSSF LSVGFLTLGG FVGGVLFWGG FNTALEATNT EAFCTSCHEM
QANVFEELTR TVHYTNRSGV RAGCPDCHVP HEWTDKIARK MQASKEVWGH LFGTIDTRRK
FLDQRLRLAE HEWARLKAND SLECRNCHSE VAMDFARQTD RAGMIHTQYL IQTEGYTCID
CHKGIAHELP DMRGIDPGWL PPAELRAALA PDLEGLRQHL AE
|
|---|
| |