Gene Rsph17025_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3967 
Symbol 
ID5086143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp873168 
End bp874016 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID640485526 
Producthypothetical protein 
Protein accessionYP_001170126 
Protein GI146279968 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.420932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.148579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCGG TTCTCGAAGC CCGCAACATC GTGCGCGACT ACGCAGGCTC CGGCGGGCTC 
TTCCGCCGGG CGCGGCCCGT GCGCGCGCTC AAGGGTATCT CCTTTGCCGT CGAGCAGGGC
CGTACCCTGG CCGTGGTGGG TGAAAGCGGC TGCGGCAAGT CCACGCTGGC GCGGATCATC
ACCCTGATCG ACCCCGCGAC CGAGGGCGAT CTGCTGATCG ACGGCGAAAA GATCGATATC
GCGACGCAAG GACTGCCGCC GGGCCTGCGC CGCAAGGTGC AGATCGTGTT CCAGAACCCC
TACGGCTCGC TCAACCCGCG CCAGAAGGTC GGCGACATGC TGATGGAGCC GCTGATCCTG
AACACGAAGG ACAGCGCCGA GACGCGGCGC GAGAAGGCGA TGGCGATGCT GGTGAAGGTG
GGGCTCAGCC CTGAGCACTT CCACCGCTAT CCGCACATGT TCTCGGGCGG GCAGCGCCAG
CGCCTCGCCA TCGCGCGGGC GCTGATGGTG AACCCGCGGC TTCTGGTGCT GGATGAACCC
GTCTCGGCGC TGGATCTTTC CGTGCAGGCG CAGGTGCTGA ACCTGCTCGC CGACCTGCAG
GAAGAGTTCG ACCTGACCTA TGTCTTCATC AGCCATGACC TGTCGGTGGT GCGTTACATC
GCCGACGAGG TGATGGTGAT GTGGAAGGGC GAGGTGGTGG AATACGGCAC CCGCGACGCG
GTCTTTGGCG CGCCGCAGCA CGACTACACG CGGACGCTCT TTGCCGCGAC GCCGGTGACG
GATGTCGCCG CCATCCGCGC CCGCGTCGAG CGCCGCCGCG CGGCCGGCAT CGGCGCTTCG
GCGGCCTGA
 
Protein sequence
MAPVLEARNI VRDYAGSGGL FRRARPVRAL KGISFAVEQG RTLAVVGESG CGKSTLARII 
TLIDPATEGD LLIDGEKIDI ATQGLPPGLR RKVQIVFQNP YGSLNPRQKV GDMLMEPLIL
NTKDSAETRR EKAMAMLVKV GLSPEHFHRY PHMFSGGQRQ RLAIARALMV NPRLLVLDEP
VSALDLSVQA QVLNLLADLQ EEFDLTYVFI SHDLSVVRYI ADEVMVMWKG EVVEYGTRDA
VFGAPQHDYT RTLFAATPVT DVAAIRARVE RRRAAGIGAS AA