Gene Rsph17025_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3738 
Symbol 
ID5085604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp644040 
End bp645194 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content66% 
IMG OID640485300 
Producthypothetical protein 
Protein accessionYP_001169909 
Protein GI146279751 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC TCACAAAGCG CATCGTCGAC GCCGCAGAAG CGCAAACCGC TGAATACTTC 
GTCTGGGACA ACGACATCCC GGGCTTCGGA TTGCGGGTGT TGCCAAGCGG GCGCAAAGGC
TACGTCGTGC AATATCGCGC CGGACGCCGG TCCCGGCGGA TCAGCCTCGG GCCCACCACC
GTGCTGACCT GCGAGCAGGC GCGCACCCGC GCCATCACCA TCGTCGCCGC TGCGCGCAAC
GGGCAAGACC CTGCGGCCGA GCGCGACGCC GGGCGCAAGG CGATCACCAT AAAGGAACTG
GCGGAACGGT TCGACAAGGA ACACATCGCC ATCCGCTTGA AGGCCAGCAC GGGAAAGGAG
TATCGCCGGA ACCTGCAGCG CTTCATCCTG CCCGCCCTCG GGCAGTTGAC GGTCACGGGG
ATCACCCGGG CGGATGTCGC CAAGTTCCAC CACGACCTGC GCCACATCCC CTATCAGGCC
AACCGCTGCC TCGAGGTGAT CTCGAAGATG TTCAGCCTGT CCGAGATGTG GGGCCTGCGT
CCGGACGGGA CCAACCCGCG CAAGCACATC AGGAAGTACC CCGAGGAGAA GCGCGAACGG
TTCCTGAGCG CGGCCGAACT GCGCCGGATC GGCGAGGTGC TGCGCGAGAT GGAGGCGGAA
GGGGTTGAAC TGCCCTCGGC CATCCTCGCC GCGCGCCTCC TGATCCTGAC AGGGTGCCGC
CTGAACGAGA TCATTTCCTT GAAATGGTCC TACGTCGATT TCGACGTCCC AGCCCTGCGC
CTGCCGGATT CCAAAACAGG GGCGAAGGTC GTCCACGTTG GCCAGCCAGT GGTGGAGTTG
CTGCGGGATG CTCAACGCAT CGACGGCAAC CCGTGGGTGA TCGCTGGCAC CCTGCCCGGC
AAGCCGCTCA GTGATCTGCA ACCCTTCTGG CAGCGCGTCC GTGCCCGCGC CGGGGTCAAG
GACGTCCGCA TCCACGACCT GCGTCACACC TTCGCGTCCA CGGCCGTGGC GTCGGGTCAG
GGTCTTCCAA TGATCGGCAA GCTCCTTGGC CACACGCAGG TCCAGACAAC GGCGCGATAC
GCCCATCTCG CGGCGGAACC CGTCCGGATG GCGGCCGACG CCGTCGCGCA GAACCTGCGG
CAATCCTTGG GATAA
 
Protein sequence
MPKLTKRIVD AAEAQTAEYF VWDNDIPGFG LRVLPSGRKG YVVQYRAGRR SRRISLGPTT 
VLTCEQARTR AITIVAAARN GQDPAAERDA GRKAITIKEL AERFDKEHIA IRLKASTGKE
YRRNLQRFIL PALGQLTVTG ITRADVAKFH HDLRHIPYQA NRCLEVISKM FSLSEMWGLR
PDGTNPRKHI RKYPEEKRER FLSAAELRRI GEVLREMEAE GVELPSAILA ARLLILTGCR
LNEIISLKWS YVDFDVPALR LPDSKTGAKV VHVGQPVVEL LRDAQRIDGN PWVIAGTLPG
KPLSDLQPFW QRVRARAGVK DVRIHDLRHT FASTAVASGQ GLPMIGKLLG HTQVQTTARY
AHLAAEPVRM AADAVAQNLR QSLG