Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3682 |
Symbol | |
ID | 5085542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 575612 |
End bp | 577171 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640485240 |
Product | hypothetical protein |
Protein accession | YP_001169855 |
Protein GI | 146279697 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.552968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGTAA CGATTAGAAG CAAGCTGGTC ATGGCCTTCG CCGTGGTCTT CGTCATGTCC GGCCTGGCGG TCGCCATTTC CCTCTTTCAT CTCCAGCGAC TCGACGCCCG GATGACCCAG GTCATCAACG AGAATGTCCA TCAGGTCGTC CTCGCGCAGC GGCTGAGCAT CGGCCAGTAT CGCGTCATGG CCAGCATCCG CGCGCACTTG CTCGACCGCG ACGCCGATTC GGCCTTCCGC ATCGAGACGA GCGTTCAGGA AGGACGGATG GTCCAGCGCC GCGCCCTGCG CGAATTGCGC GACAGCGCCG CGGATGAGAC CAGCCGCGAC ATCGTCGTGC GCTACAACGA CCTGCGCAAG CAGATCCAGC GCATCAACAA CCGGGCGATG ATCTTCTCGC TCGGCGGAAA CCCCGAGGGT GCGGCCAGCT ACCTGCGCGA CAACGGGGCC AGCGATCTGG AACGGTCGCT CGAGACTCTC TCGGAGGAAC TGGTGGCGCA CAAGCTCGCG GTCCTGGAGC GCGTGAAGGC CGAATCGGAA AAGGACGTGC GCGGCACCTT CGCGCTCGTG ATGCTGATCG CCGCTCTGGC CGGGGTTCTG GGTTCCGCCG CCGCGCTCTG GATCACCCTT TCGATCGGCC GCGGGCTCCG CCGGGCGCTG GCCCTGACAC AGCGGGTCGC ACAGGGCGAC CTGTCGCGAG GCGAGGAGGT CCGGGGCCGC GACGAGATCG CCGACCTTCT CGGGGCGAGC AACAGCATGC TTCTCAAGCT GCGGGAGGTG GTCGAGGAAG TTGGCGGCAC CGCACGCGAC GTGGCCGCCG CAAGCGGCCG GATGGCCTCG GCCTCGGGCC AGCTGAAGTC CGGCACAGAA GAACAGGCGG CGGCAACGGT CGAAGCCTCG GCCGCGGTCG AGCAGATGGT GGGCAACATC ACCCAGTCCG AGGAGAATGC GGGCATGACG GCCCGCATCG CCAGCAGTTC CACCGATGAC GCCCGCCGCT GCGGCGAGGC GGTTGCGGAC GCCGTGCGCT CGATGCAGGA GATCGCCGAG CGGATCGGGA TCGTCGGCGA AATCGCCCGC CAGACCGATC TTCTTGCCCT CAACGCCGCC GTCGAGGCCG CGCGGGCCGG CGAACAGGGT CGCGGCTTTG CGGTCGTCGC CGCCGAAGTG CGCCGACTTG CCGAACGCAG CGCCGAAGCG GCGGCCGAGA TCTCGACGCG TTCGGCCGAA ACCGCGCGGG CCGCGGCCGG CGCGGGCGAG ATGATCGACC GACTGGTCCC CGAGATCGAG CGCACCTCCA ATCTCGTGAC GGACATCTCG GTGGCCTCGC GCGAACTGTC CGAAGGGGCG CGGCAGGTCT CGCTCGCCAT CGATGCGCTG GATCGGGTGA CGCAGCAGAC CGAGGCCGCG TCGCGCCTGC TGGATGAGGA TGCCGACGAA CTCGCCACAC GGGCGCGCCG CCTGTTGACC AGCGTCAACT ATTTCCGCAC CGGCACCGAG GCTCTGGCCG CGGAGGACGA TCTGGCCCCT GCCCCGCAGC CGCTGAGGGC GGTGGCCTGA
|
Protein sequence | MKVTIRSKLV MAFAVVFVMS GLAVAISLFH LQRLDARMTQ VINENVHQVV LAQRLSIGQY RVMASIRAHL LDRDADSAFR IETSVQEGRM VQRRALRELR DSAADETSRD IVVRYNDLRK QIQRINNRAM IFSLGGNPEG AASYLRDNGA SDLERSLETL SEELVAHKLA VLERVKAESE KDVRGTFALV MLIAALAGVL GSAAALWITL SIGRGLRRAL ALTQRVAQGD LSRGEEVRGR DEIADLLGAS NSMLLKLREV VEEVGGTARD VAAASGRMAS ASGQLKSGTE EQAAATVEAS AAVEQMVGNI TQSEENAGMT ARIASSSTDD ARRCGEAVAD AVRSMQEIAE RIGIVGEIAR QTDLLALNAA VEAARAGEQG RGFAVVAAEV RRLAERSAEA AAEISTRSAE TARAAAGAGE MIDRLVPEIE RTSNLVTDIS VASRELSEGA RQVSLAIDAL DRVTQQTEAA SRLLDEDADE LATRARRLLT SVNYFRTGTE ALAAEDDLAP APQPLRAVA
|
| |