Gene Rsph17025_3663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3663 
Symbol 
ID5085523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp557081 
End bp558265 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content65% 
IMG OID640485221 
Producthypothetical protein 
Protein accessionYP_001169836 
Protein GI146279678 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.184617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.501234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAC TCACCTGGCA CGGAAAGCAC GATGTCCGCG TCGAGACCCA CCCCGATCCC 
GAGATCGTCA ATCCGCGGGA CGCGATCATC GAGGTGACGG CCACGGCCAT CTGCGGCTCC
GATCTTCATC TTTATGACGG CGTGATCCCG GGCCTGATGT CCGGCGACAT CCTCGGGCAC
GAGTTCATGG GCCGCGTGGT CGAGACCGGC CCGAAAAGCA CCCTGACCAA GGGGCAGCGC
GTCGTGGTGC CCTTCACCAT CTCCTGCGGC AAGTGCTTCT TCTGCGAACA TCAGCTGTTC
TCCGCCTGCG ACAATTCCAA TCCGGCCGAG AAGCAGGACC TTTCGGAGCC GCTCTATGGC
CATGCGGTGT CCGGCCTCTT CGGCTATTCG CATCTGACGG GCGGCTATCC GGGCGGGCAG
GCCGAATATG TCCGGGTGCC CTATTCCGAC GTGGGGCCGA TCGTGATCCC GGACGGGCTC
GACGATGAGC AGGTGCTGTT CCTGTCCGAC ATCCTGCCGA CCGGCTGGAT GGCCGCCGAG
AACGCCGAGA TCCAGGAGGG GGACACGGTG GCTGTCTGGG GCTGCGGGCC CGTCGGCCTC
TTTGCCATCC AGTCCGCCTT CCTGATGGGC GCGGGCAAGG TCATTGCCAT CGACGAATAT
CCCAAGCGGC TGGCGTTGGC CCGCAAGCTC GGCGCCGAGG TGATCGACTT CCGCCGGACC
CGCGTGCTCG AGGCGCTGAT GGAGATGTCG GGCGGGCTCG GGCCGGATGC GGTCATCGAC
GCGGTCGGAA TGGAAGCGCA TGGCTTCATG CCGGACACGC TGATGGACAA CATGAAACAG
CGGATCGGCA TTGGCGCCGA CAGCGCCCAC GCGCTGCGCG AGGCGATCAT GGCGGTGCGC
AAGGGTGGGC GCGTGTCGGT GCCCGGCGTC TATGGCGGCT TTCTCGACAA GTTTCCGCTG
GGCGCGCTGA TGGAGAAGGG GCTCACGCTC AAGACCGGGC AGACCCATGT GCAGCGTTAC
ACCGAGGAGC TTCTCAGGCG GATCGGCGAC GGCGAGATCG ACACGACCTT CCTGATCTCG
CACCGGCTTC CGCTCGAGGA GGCCGCACGC GGTTACGAGA ATTTCCGCTA CAACCAGAAC
GAATGGACGA AGGTTGTGCT GAAGCCGGGA ATGGCGGCCG CCTGA
 
Protein sequence
MRALTWHGKH DVRVETHPDP EIVNPRDAII EVTATAICGS DLHLYDGVIP GLMSGDILGH 
EFMGRVVETG PKSTLTKGQR VVVPFTISCG KCFFCEHQLF SACDNSNPAE KQDLSEPLYG
HAVSGLFGYS HLTGGYPGGQ AEYVRVPYSD VGPIVIPDGL DDEQVLFLSD ILPTGWMAAE
NAEIQEGDTV AVWGCGPVGL FAIQSAFLMG AGKVIAIDEY PKRLALARKL GAEVIDFRRT
RVLEALMEMS GGLGPDAVID AVGMEAHGFM PDTLMDNMKQ RIGIGADSAH ALREAIMAVR
KGGRVSVPGV YGGFLDKFPL GALMEKGLTL KTGQTHVQRY TEELLRRIGD GEIDTTFLIS
HRLPLEEAAR GYENFRYNQN EWTKVVLKPG MAAA