Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3585 |
Symbol | |
ID | 5085737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 474405 |
End bp | 475370 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640485143 |
Product | hypothetical protein |
Protein accession | YP_001169759 |
Protein GI | 146279601 |
COG category | [K] Transcription |
COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0184789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.871841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGGG AGATGCACGA CGATCCGTTC ACCGCGGAAG TCTGCTGGCA CTACTACGTC AACGGCATGA CTCAGGCCGA GATCGCCAAG CAGCTCGACG TGACTCGGCT GCGGGTGAAT CAGGCGATCC AGCGGGCCAA GACGCTGGGG ATCGTGCAGG TGCGCATTGA TTCTCCCTTT GTCGCGCGGA TCGAGCTGCA AGAGGCGCTC CGGGTTGAGC TGGACATCCC GCGCGTGCAG ATCGCCCCCG CTCGCCGCGA GGATTATGAT TGCCATTCGG CGGTCGGTGC GGCGTTGGCC GATTATCTGA TCGAGAAATT GCGCACCCGC GGCTGGCGCT CGATCGGCGT CTCGTGGGGG GTGACGCTCG AGCAGACCTT CCGCCGCCTG CCCGCGCAAC CCCATCCCGA TCTCGAGATC GTCTCGATGC TGGGGGGCAC GATGCAGGGC GCCTCCTTCA ACTCGTTCAG CATCGTCTCG GGCTTTGCCG CGGCGCTCGG CGCGAAATAT TCGCTGCTCG CGGCCCCGAT CTTCCTGTCG GCGGGGGTCG ATCGCGCGGC CTTCCTCGCG CAGGAGATCT TCGCCGACCA TTTCGCCAAG TTCGAGACGC TCGACGCGGC GATCCTGACC GCAAGCGACG TGTCCGAGCG GTCGTTTCTC GTTGCGAACG GCCTGCCCAA GGAGGTGGCG CCGCAGGACC TGATCCGGGC CGGCGCGATC GGGGACGTGC TGGGACATTT CCTCGACGCC GACGGTGCCG AGATCGACCA TCCGATCTGC CAGCGCACGA TCGGCGTCGA TCTCGGGACG GTGTTGCGCA CCCCCGAAAA GATCCTCGCC GCAGCCGGGC CCCACAAGGT CGGGATTATC CGGGCCGCGT CGCGGCGCGG ACTGGTGGAT ACGCTGATCA CCGACGACGT GACGGCCGAG CTGCTGCTCG GCAAGCGACC CGGCCTGTCC GGCTGA
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Protein sequence | MVREMHDDPF TAEVCWHYYV NGMTQAEIAK QLDVTRLRVN QAIQRAKTLG IVQVRIDSPF VARIELQEAL RVELDIPRVQ IAPARREDYD CHSAVGAALA DYLIEKLRTR GWRSIGVSWG VTLEQTFRRL PAQPHPDLEI VSMLGGTMQG ASFNSFSIVS GFAAALGAKY SLLAAPIFLS AGVDRAAFLA QEIFADHFAK FETLDAAILT ASDVSERSFL VANGLPKEVA PQDLIRAGAI GDVLGHFLDA DGAEIDHPIC QRTIGVDLGT VLRTPEKILA AAGPHKVGII RAASRRGLVD TLITDDVTAE LLLGKRPGLS G
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