Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3584 |
Symbol | |
ID | 5085736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 472753 |
End bp | 474207 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640485142 |
Product | hypothetical protein |
Protein accession | YP_001169758 |
Protein GI | 146279600 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.638591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTATT CGTTGAAATA CGGCGCTTCG GTGCTGGCGC TTGCGCTGGC GGCCGGCGGG GCCTTTGCGC AGGATCTTCA GATCGAGAAC GCCGACTGGT GGCAGGAAGC CGGCGCGTCC TTCAAGGGCA CGACGCTGCG CGGCGTGACC GAATCCACGC CCGCCTCCAA CTTCGTGGCC GATGTGCTCG CGCCCAGGTT CGAGGAACTG ACCGGCATCC GCGTCGATGT CGAGACCACC TCGTGGGACC AGATGTACGA CAAGGCCATC AAGGACATGG AGGCCGGCAC CGGCATCTAT GACATGGTCT ATATCGAGCA GGACATCATC TACGCCTATC TGGCGCGCGA CTTCCTCGTG AACCTGACGC AGGCTCTGGA AGAGAAGCCC GATCTGAAGG CGGCCGGCTA CGCCGAGGAG AACCTGACCT CGTTCGCCGA CAACTTCCGC GGGGCCGAGG ATGGCAACCT CTACGGGATG CCGATGGAGG CCTTCATCAA GGTCTATCTC TACCGGACCG ACCTCTTCAA CGACCCGGAG GTGCAGGCGG CCTTCAGGGA GCAGACCGGC CGCGACCTCG CCCCGGCGAC CAATCACGCC GAATACGCCG AGATCGCGCA GTTCTTCACC CAGTGGGGCA AGGAGAACGG CGGCAAGCTC TGGGGCACGA CGGCGCAGGC CCACACCGGC CACCCGGCCT CCTGGTACGA GTATTTCGAG TCCGTGGCGC CGACCTACGG CGTTTACGAC TGGGGCATCG ACGCTGCCAA CAACTATGCC GCCAGCGTCG AGAACGGCGG TCGCATGAAC TCGCCCGAGG CGAAGGAAGC GATGAAGTGG TGGCTGTCGA TGCGCGACAT CGCCCCGCCC GAGTCGGTGC AATCGACCTG GACCGAGGTC GCCACCACCT TCGCCGCCGG CCGCGTGGCG CAAGGTCTCG TCTATGGCGA GAACGTCGCC TGGATCGCCT CGGATACATC CAAGTCGCGC GTCGTGGGCA ACGTGGCCGT CGCGCTGCCG CCGGTCGAGG AGGGGGTGAT GGCCGCCGCC GAGGCCGGAG AGGGCTACAT CGGCTACTAT GACGGCGGCG CCTTCGGCCT GCCGGTCACC TCGAAGAACA AGGACGCGGC GGTGCTGTTC CTGCAGTTCA TGGCGCTGCC GGAGGTGCAG GAGGAATGGG CGGCCGCAGG TTCGCGCGTG ACGCTGACCT CGACCTACGA GACGCCGAAG GTGCAGGCGC TCGACGAGCA GCTCGGCGGC TATTTCTCGA TGCTGCGCGA TCAGGGCAAG CTGTTCAAGG GCGCGCCGGA ATATCCGTTC CACGCCCAGC TGCGCGAAGC CACCGCGCCG ATCTTCTACG ACATCCTGAC CGGCGCCGTG GGGCCGGACG AGGGTCTCGA CCGGATGGCG GCCAAGGCCG AGGAAGAGCT GACGAGCCTC GGCTACCGCA AGTAG
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Protein sequence | MGYSLKYGAS VLALALAAGG AFAQDLQIEN ADWWQEAGAS FKGTTLRGVT ESTPASNFVA DVLAPRFEEL TGIRVDVETT SWDQMYDKAI KDMEAGTGIY DMVYIEQDII YAYLARDFLV NLTQALEEKP DLKAAGYAEE NLTSFADNFR GAEDGNLYGM PMEAFIKVYL YRTDLFNDPE VQAAFREQTG RDLAPATNHA EYAEIAQFFT QWGKENGGKL WGTTAQAHTG HPASWYEYFE SVAPTYGVYD WGIDAANNYA ASVENGGRMN SPEAKEAMKW WLSMRDIAPP ESVQSTWTEV ATTFAAGRVA QGLVYGENVA WIASDTSKSR VVGNVAVALP PVEEGVMAAA EAGEGYIGYY DGGAFGLPVT SKNKDAAVLF LQFMALPEVQ EEWAAAGSRV TLTSTYETPK VQALDEQLGG YFSMLRDQGK LFKGAPEYPF HAQLREATAP IFYDILTGAV GPDEGLDRMA AKAEEELTSL GYRK
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