Gene Rsph17025_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3584 
Symbol 
ID5085736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp472753 
End bp474207 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content66% 
IMG OID640485142 
Producthypothetical protein 
Protein accessionYP_001169758 
Protein GI146279600 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.638591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTATT CGTTGAAATA CGGCGCTTCG GTGCTGGCGC TTGCGCTGGC GGCCGGCGGG 
GCCTTTGCGC AGGATCTTCA GATCGAGAAC GCCGACTGGT GGCAGGAAGC CGGCGCGTCC
TTCAAGGGCA CGACGCTGCG CGGCGTGACC GAATCCACGC CCGCCTCCAA CTTCGTGGCC
GATGTGCTCG CGCCCAGGTT CGAGGAACTG ACCGGCATCC GCGTCGATGT CGAGACCACC
TCGTGGGACC AGATGTACGA CAAGGCCATC AAGGACATGG AGGCCGGCAC CGGCATCTAT
GACATGGTCT ATATCGAGCA GGACATCATC TACGCCTATC TGGCGCGCGA CTTCCTCGTG
AACCTGACGC AGGCTCTGGA AGAGAAGCCC GATCTGAAGG CGGCCGGCTA CGCCGAGGAG
AACCTGACCT CGTTCGCCGA CAACTTCCGC GGGGCCGAGG ATGGCAACCT CTACGGGATG
CCGATGGAGG CCTTCATCAA GGTCTATCTC TACCGGACCG ACCTCTTCAA CGACCCGGAG
GTGCAGGCGG CCTTCAGGGA GCAGACCGGC CGCGACCTCG CCCCGGCGAC CAATCACGCC
GAATACGCCG AGATCGCGCA GTTCTTCACC CAGTGGGGCA AGGAGAACGG CGGCAAGCTC
TGGGGCACGA CGGCGCAGGC CCACACCGGC CACCCGGCCT CCTGGTACGA GTATTTCGAG
TCCGTGGCGC CGACCTACGG CGTTTACGAC TGGGGCATCG ACGCTGCCAA CAACTATGCC
GCCAGCGTCG AGAACGGCGG TCGCATGAAC TCGCCCGAGG CGAAGGAAGC GATGAAGTGG
TGGCTGTCGA TGCGCGACAT CGCCCCGCCC GAGTCGGTGC AATCGACCTG GACCGAGGTC
GCCACCACCT TCGCCGCCGG CCGCGTGGCG CAAGGTCTCG TCTATGGCGA GAACGTCGCC
TGGATCGCCT CGGATACATC CAAGTCGCGC GTCGTGGGCA ACGTGGCCGT CGCGCTGCCG
CCGGTCGAGG AGGGGGTGAT GGCCGCCGCC GAGGCCGGAG AGGGCTACAT CGGCTACTAT
GACGGCGGCG CCTTCGGCCT GCCGGTCACC TCGAAGAACA AGGACGCGGC GGTGCTGTTC
CTGCAGTTCA TGGCGCTGCC GGAGGTGCAG GAGGAATGGG CGGCCGCAGG TTCGCGCGTG
ACGCTGACCT CGACCTACGA GACGCCGAAG GTGCAGGCGC TCGACGAGCA GCTCGGCGGC
TATTTCTCGA TGCTGCGCGA TCAGGGCAAG CTGTTCAAGG GCGCGCCGGA ATATCCGTTC
CACGCCCAGC TGCGCGAAGC CACCGCGCCG ATCTTCTACG ACATCCTGAC CGGCGCCGTG
GGGCCGGACG AGGGTCTCGA CCGGATGGCG GCCAAGGCCG AGGAAGAGCT GACGAGCCTC
GGCTACCGCA AGTAG
 
Protein sequence
MGYSLKYGAS VLALALAAGG AFAQDLQIEN ADWWQEAGAS FKGTTLRGVT ESTPASNFVA 
DVLAPRFEEL TGIRVDVETT SWDQMYDKAI KDMEAGTGIY DMVYIEQDII YAYLARDFLV
NLTQALEEKP DLKAAGYAEE NLTSFADNFR GAEDGNLYGM PMEAFIKVYL YRTDLFNDPE
VQAAFREQTG RDLAPATNHA EYAEIAQFFT QWGKENGGKL WGTTAQAHTG HPASWYEYFE
SVAPTYGVYD WGIDAANNYA ASVENGGRMN SPEAKEAMKW WLSMRDIAPP ESVQSTWTEV
ATTFAAGRVA QGLVYGENVA WIASDTSKSR VVGNVAVALP PVEEGVMAAA EAGEGYIGYY
DGGAFGLPVT SKNKDAAVLF LQFMALPEVQ EEWAAAGSRV TLTSTYETPK VQALDEQLGG
YFSMLRDQGK LFKGAPEYPF HAQLREATAP IFYDILTGAV GPDEGLDRMA AKAEEELTSL
GYRK