Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3574 |
Symbol | |
ID | 5085726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 460053 |
End bp | 461903 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640485132 |
Product | hypothetical protein |
Protein accession | YP_001169748 |
Protein GI | 146279590 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC ACCTGAACCA TGTGCGCGAG ATCGAGGCCG TGGCCGAGGG CCGGACCTCG GCGCGGGATG CGGCGGTGGT CGAGAGCTGG ATGCGGTGCC TGACCAAGCA CCGGCTGAAC CCGGCCGCCC GCTCCGAGGC CTACATCCTG CCCGAGGCGG CGCTGCGCGA ACATCGCCAG CGATCCGAGG ATCTGATCGC CATTGCGCGC TCGGGGATCG AGAACCTCTA CGCGCTGGTG GCGGGCCAGA ATTATGTGCT GCTGCTGGCG GATCGCGCCG GGGTGACGGT CGAGTATCTG GGCGACGAGG CGCAAAAGCA GGCGCTGCGC CAGAGCGGCC TGTGGCTCGG CGCGGAATGG TCCGAGGGCA GGGCGGGCAC CTGCGCGCTC GGGGCCTGCA TCGAGACGGG GGAGGCGCTG GTGATCCATC AGACCGACCA TTTCGACAGC ACGCACACAA GCCTCTCCTG CACCGCGGCC CCGATCTATG ACACGGCGGG TCGGCTGACG GCGGTGCTCG ACATCTCGCT TCTCTGCTCG CCGCGGGCCA AGGCCAGCCA GTCGCTGGCG CTGAACCTCG TGCAGGCCTC GGCGCGGCGG ATCGAGATGG CGAACCTGAT GGCCGAGAAC CGCCGCGAGT GGGTGCTGCG CCTGTCGCGC TCGCCCGAGT TTCTCGATGT CGATCCCGAG GCGGCGCTGT CGCTCGATGG ATCGGGCCGG GTGCTGGGCA TGACGCATGG GGCGGCGCGG ATATTGGCGC GGGCGACGGG GTGCGACTGG CGGCGGGCGG GCGATCTGAT CGGCCGTCCG CTGCCGGATT TCCTGAATCT CACCACGGAC CGGCTCGAGG CGCTCACCCG GCAGCGGCCG GCCGCCGAGA GGTTCATCGA AACCCGCGAC GGCCACCGGC TCTTCGCCCA CGCGATCGAG CCCCGGCGCC TCCCGGTGAG GATGCCAGCG GCGAGGGGCC AGCTTTCGCC CGCACTCCGC GGGCTTGCGG GCGACGATGA CCCCATGACG GCGCTGCTGC GCACGGCCGC GGCGCTGGCG GTCCGGCCGT TGCCGATCTC GATCGAGGGC GAGACGGGGG CGGGCAAGCT GACGCTCGCG CGGGCGATCC ACGACGCGGG TGGCGCGGGG CCTCTCGTCG TCGTCCATTG CGCCGAGGTG GGAGATGACG AGGCGCTGCT CTTTGGCCGC GCCGCGGCGC GGCGTGCCGA TCAGGGGCTG ATCGCGGCGG CCGAGGGCGG GACGCTGGTG CTGCACCGGG TCGAAGAGCT TGGGCCGCGG GTGCAGGCCC GTCTCATGCG GCTGGCGGCC GAGGGAACCT ACCTTCCGGT GGGAGCTGTG CGGCCGGTGC CCGCCCGGCT GCGGCTGATC TCGACCCTCG CGCACGAGGC GCCGGCTCTG CGGGCCGATC TCGTGCATCG GCTGGGCGCC CGTCTGCGTC TGCCGGCGCT GCGCGACCGG GCCGACCGGC TGTGGCTGGC CGAACGCGCG CTGGCGGCCG AGGGGGCAGA GCTGTCCTTC TCGGCCGAGG CGCTGGCCGT GCTGGCCGCC CACGGCTGGC CCGGCAACCT GCGCGAGCTG TCGCACCTGG CGGCGACGGC GCGCCACGGT CGAGGGGCCG GTCGTGCGAG TGGAGGATCT GCCGCCATCA TTGACCGGCA CGCCGCCGCG CCGGGCCGAG GCCGCGGGCG CCGTGCTGGC CCAGCTTCTG CGGCAGACCG GCGGGAACAT CTCCGAGACG GCGCGGCGGA TGGGCGTCAA CCGCTCGACG GTGCACCGGC AGATCCGTCG GCTGGGCATG ACGCGCTGAG GGTTCAGCGC GCCGCGGGCG CTGGCGGCTG A
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Protein sequence | MDLHLNHVRE IEAVAEGRTS ARDAAVVESW MRCLTKHRLN PAARSEAYIL PEAALREHRQ RSEDLIAIAR SGIENLYALV AGQNYVLLLA DRAGVTVEYL GDEAQKQALR QSGLWLGAEW SEGRAGTCAL GACIETGEAL VIHQTDHFDS THTSLSCTAA PIYDTAGRLT AVLDISLLCS PRAKASQSLA LNLVQASARR IEMANLMAEN RREWVLRLSR SPEFLDVDPE AALSLDGSGR VLGMTHGAAR ILARATGCDW RRAGDLIGRP LPDFLNLTTD RLEALTRQRP AAERFIETRD GHRLFAHAIE PRRLPVRMPA ARGQLSPALR GLAGDDDPMT ALLRTAAALA VRPLPISIEG ETGAGKLTLA RAIHDAGGAG PLVVVHCAEV GDDEALLFGR AAARRADQGL IAAAEGGTLV LHRVEELGPR VQARLMRLAA EGTYLPVGAV RPVPARLRLI STLAHEAPAL RADLVHRLGA RLRLPALRDR ADRLWLAERA LAAEGAELSF SAEALAVLAA HGWPGNLREL SHLAATARHG RGAGRASGGS AAIIDRHAAA PGRGRGRRAG PASAADRREH LRDGAADGRQ PLDGAPADPS AGHDALRVQR AAGAGG
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