| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3525 |
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| Symbol | |
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| ID | 5085941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 409689 |
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| End bp | 411662 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640485084 |
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| Product | ATP-dependent exoDNAse beta subunit |
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| Protein accession | YP_001169700 |
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| Protein GI | 146279542 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.297188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG AAACAATTAC GCTGTCCAAC TTCAGGTGCT TCGGTGCTGA TCCTGTCGTG
ATCAGCCTTG AGGAGAACCT AACGGCGCTT GTGGGGAACA ACGGTTCGGG CAAAACCGCT
GTCTTTATGG CGCTTGCCCG CCTTTTCGGG GCGACCGCCG CGCAGCGAGC CCTGCGCAAG
TCGGACTTTC ATATTGCAGG GAACCAAGAC GCGCTCGCAT CTGAGACAGA GCTCGCGATT
GACTGTGTTC TCGGTTTTCC TGAGCTGGAT GGTGACGATG ATGAAGGTAC TGACGCAGTG
CCTGAAGCAC TCAGTCATAT GGCAACGGAT GGTGAAAACG GTGCGTTAAA AGTCCGCATT
CGGCTTCAGG CAAAATGGAT TGATAACGGC ACCCCTGACG GAATTATCGA AGAATCATTG
CGATGGGTCC AGTCACTTGA TGACGAATTT GAATGGGATG ACTGTCGCCC TGTACAAAAT
GTTGAACGAA ATTTCATCCA GCTCGTTTAT GTTCCGGCAA ACAGGAATGC CGCCGACCAG
GTGACGGCTC TTCTCAAAGG CCGCTTGTGG CGTGCGGCGA AATGGTCAGA AGGGCTTGCC
GAATCGGCAG CTGAGGCAGC TGGCGAGCTT CAGAAAGACT TTGACGAAGA AGAGCCTTCG
GCATTCATCC TGGACAGGCT GGAAAAGCGA TGGACGCAGC TTTATCAGGC TGACACTGAC
CGCAAGCCCA AGCTGCGTTT GATCGATTCT ACGCTGGAAG AGCTTGTGCG CAGGGCGGAG
TTTGTGTTTT TTCCTGATGA AGCGGGTCAG GCACGGAATC TGGATGACCT TAGCGATGGT
CAGCGATCCC TCTTTCACAT TGCCTTGACG GCCGCGGTCC TTGAAATCGA GAGGGATGCG
CTTGCTCTGG ACGCCGATGA GAGCATGTTC GACCAGGAAA AACTTCGCCG GACGTACCTG
ACAATCCTTG CCATCGAAGA GCCGGAAAAC AGCCTTTCGC CTTTTTTCTT GTCGCGAATC
ATGACGCAGG CACGAGAGAT TGGAGAGCTC GACACTGCAC AGATCCTGAT CTCCAGCCAC
AGTGCCAGCA TCTTGAGCCG CGTGGAACCC GAAGAGGTCC GTTACGCCAG GTTGGACCAG
GAAAGCAGAT CTTCCTCCAT TAGTTCTCTG TCATTGCCTG ATGATGACGA AGATGCGCAG
AAATATATCC GTCTGGCGGT CAGAGCATAC CCTGAGCTTT ACTTCGGGAG GTTTGTTATC
CTTGCGGAGG GAGATTCCGA AGCAATTATT CTGCCACGTC TTGCGGAAGC AGCGGGCTTC
CCATTGGATA GGTCATTTGT ACCCATCGTC CCTCTCGGCG GCCGTTATGT TCGCCATTTC
TGGCATCTTT TGAGTGGACT TAAAATTCCT TATGCAACTT TGCTGGATCT CGATTTGGGG
CGAAAACATG GCGGTTCAAA TATAATCGCG ACAACGATAG GCGAATTAAA TTTGATTGGG
CGTGATCTTG CAGAGAATAG GCTCGTGGCC AACGGTGACG TAAATCTCGC TGATATCGGC
GATCTCGATG ATTCTGAATT GCTGGAAGAG GGGCAGGACC ACCCGTGGCT GAAGATGCTA
CGAAGGGAGG CGGTCTATTT CTCGTCACCA ATCGACGTTG ACTTTGCTAT GCTCCGTTCG
TTCCCCGACG CGTACCAGCA TGTGCGGCCT AGCGGGCGGG GCCCGCGCAG ATCGGCGAAA
GCAATTGAAA ATAAGAAGAG TGTCACTCTG AAGACAGATG GCAACCCCGA TCTATATGAA
GACGCTGAAT GGCGTGACGC CTTTGTTTGG TACCCATACT TGTTTCTCAG TGACAGTAAA
CCGGGAACCC ATATTGAAGC ATTGACGCGC ATCGCTGACG AAGATCTGGT TGATGACGCA
CCGATTGAGC TCAAGCGCCT CCTTACCCGC GTCAGGAAAG CGCTCAGCCT ATGA
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| Protein sequence | MKIETITLSN FRCFGADPVV ISLEENLTAL VGNNGSGKTA VFMALARLFG ATAAQRALRK
SDFHIAGNQD ALASETELAI DCVLGFPELD GDDDEGTDAV PEALSHMATD GENGALKVRI
RLQAKWIDNG TPDGIIEESL RWVQSLDDEF EWDDCRPVQN VERNFIQLVY VPANRNAADQ
VTALLKGRLW RAAKWSEGLA ESAAEAAGEL QKDFDEEEPS AFILDRLEKR WTQLYQADTD
RKPKLRLIDS TLEELVRRAE FVFFPDEAGQ ARNLDDLSDG QRSLFHIALT AAVLEIERDA
LALDADESMF DQEKLRRTYL TILAIEEPEN SLSPFFLSRI MTQAREIGEL DTAQILISSH
SASILSRVEP EEVRYARLDQ ESRSSSISSL SLPDDDEDAQ KYIRLAVRAY PELYFGRFVI
LAEGDSEAII LPRLAEAAGF PLDRSFVPIV PLGGRYVRHF WHLLSGLKIP YATLLDLDLG
RKHGGSNIIA TTIGELNLIG RDLAENRLVA NGDVNLADIG DLDDSELLEE GQDHPWLKML
RREAVYFSSP IDVDFAMLRS FPDAYQHVRP SGRGPRRSAK AIENKKSVTL KTDGNPDLYE
DAEWRDAFVW YPYLFLSDSK PGTHIEALTR IADEDLVDDA PIELKRLLTR VRKALSL
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