Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3421 |
Symbol | |
ID | 5086082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 299213 |
End bp | 300403 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640484987 |
Product | ABC transporter related |
Protein accession | YP_001169603 |
Protein GI | 146279445 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.952582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC CCCTGGTTCT GGCGCTGCGC GAGTTGCGGC ACGACTGGAT CTCGGCGCTC TGCTTCGTGG CGGCGCTGGT GGGCGTGCTG GCGCCCATGC TGATCCTGCT CGCGCTGAAG ACGGGGGCGC TCGACTCGAT GGTCGATCGG CTGGTCGAGG ACCCGGCGAA CCGCGAACTG CTGGCCGTGG GCGCCGGTGC GCATGACGAG GCCTTCTTCC GCTGGCTGGA GGCGCGGCCC GAGGTCGGTT TCGTGGTCCC CGCCACGCGC AGCATCAACG CGCTTGCGGA TGCCGTGGTG GCCGCCTCCC CCCGCCGCGT GGTGGTGCGG GAGGTGCCGC TGGTGGTTTC GGCCGCGGGC GATCCGCTTC TTGCGGGGGA GGTCGGGCCG GGCCGGGTCT GGCTGAGCGC GCCGCTTGCG AAGTCGCTGG GGGTCGCGCC CGGCGGAGTG CTGACGATGG TGATCGGGCG GCGCATCGAC GGCCTCGAGC AGACGGCGCG GCGGCGGCTG GAGGTGGCGG GAGTCGTTCC GGCCGGAAGA TACGGTCGCC CGGCGCTGTT CCTGTCGTTG CCGGACATGC TGGCGATCGA GCGGTTCCGC GACGATCCCG CCGTCACGCC CGAAAGCTGG CTTCAGGCCG CCGCGCCGCC TGCGGCCTTT GCCAGCTTCC GCCTCTATGC CCGGACGCTC GCGGATCTTG GCGCGCTCTC GGCGGTGCTG GAGGGGTGCG GCGTCGCGGT GCGCCCGCGG GCGGAGAATG CGGCGCTGCT GCTGCAGGTG CGGCGGGGCG CGGACCGGCT GTATCTTGCG GTCGCGGCCC TGGCCGCCGT CGGGTTCTGG GCCGCGATGG CTGCCAACCT CCGCGGCATG GTGGAGCGGC GGCGTCTGGC CTTCAGCCTG CTGCGGATGC TGGGCCTGAC GCCCGCGCAG CGCGCGACGG TGCCGCTGAT CCAGAGCCTC GTGCTGATCG GGGCGGGGCT CGGCCTGTCG CTCGCCCTCG TCCTGCCGGC CGTCGCGCTG ATCAATGCGA GCTTTCCTGC CGTGGCCGAG GGGGCGGCGC TCGCGCGGCT CAGGCCGGAC CAGCTGGGCG GGGCGGCGGT GCTTGCCTGC GTGACGGCGC TGACCGCGGC GCTCTGGGCG ATGGTGGCGG TGCTGCGGAT CCCGAGCGAG GAGGTGTTGC GTCATGGCTA G
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Protein sequence | MPLPLVLALR ELRHDWISAL CFVAALVGVL APMLILLALK TGALDSMVDR LVEDPANREL LAVGAGAHDE AFFRWLEARP EVGFVVPATR SINALADAVV AASPRRVVVR EVPLVVSAAG DPLLAGEVGP GRVWLSAPLA KSLGVAPGGV LTMVIGRRID GLEQTARRRL EVAGVVPAGR YGRPALFLSL PDMLAIERFR DDPAVTPESW LQAAAPPAAF ASFRLYARTL ADLGALSAVL EGCGVAVRPR AENAALLLQV RRGADRLYLA VAALAAVGFW AAMAANLRGM VERRRLAFSL LRMLGLTPAQ RATVPLIQSL VLIGAGLGLS LALVLPAVAL INASFPAVAE GAALARLRPD QLGGAAVLAC VTALTAALWA MVAVLRIPSE EVLRHG
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