Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3331 |
Symbol | |
ID | 5085822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 207903 |
End bp | 208877 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640484900 |
Product | transport system permease protein |
Protein accession | YP_001169517 |
Protein GI | 146279359 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.411353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.472078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGTC ATCTCCTCAC CTCCGCCGTC CTCGTCCTCG TCGTCGCGTC TCCGCTCGGG GCGCAGGAGT TTCCGCTCAC TCTCGACCAT GCCTTCGGCC GGACCACCAT CCCCGAGCGG CCTGTGCGGG TGGCCACCGT CTCCTGGGCC AACCATGAGG TGCCGCTCGC CCTCGGCGTG GTTCCGGTGG GCTTTGCGCG GGCGAATTTC GGGGACGATG ATGGCGACGG CCTGCTGCCC TGGGTCGCCG GGCGGCTCGA CGATCTTGGC GCCGAGGCCC CGCGGCTGTT CGATGAGGGC GACGGGATCG ACTTCGAGGC CGTGGCGGCC AGCAAGCCCG ATGTGATCCT TGCCGCCTAT TCCGGTCTCA GCCAGTCCGA CTACGACATT CTCAGCGAGA TCGCCCCGGT CGTCGCCTAT CGTGACGCGC CCTGGGCGAC CGACTGGCGC GAGATGATCC GGCTGAACGG GACCGCAATG GGCCTTGCGG CCGAGGGCGA GGCGCTGATC GCCCGGATCG AGGGCCAGAT CGCCGAGGTC ACCGCCCGCC ATCCCGAACT TCATGGCAGG ACGGCGATGT TCGTCACCCA TCTCGACATT CGCGACCTGA GCGTGATCCG CTTCTATTCG GCCAATGACA CGCGGGTGAA GTTCTTCGAG GATCTCGGCC TCGCCTCTCC CGCGAGCGTG CGCGACGCCT CGACCGGCGG CGGCTATTCC GGGGAAGTCA GTGCCGAACG GATCGACAGT TTCGACGATG TGGACATCCT CGTGACCTAT GGCGGCGCGG CGCTGCTCGA GCGCGTGCGC CAGAACCCAC TGACCTCGCG GATGCGTGCG GTGTCGGACG GCGCGCTCGT GCTGCTGGGC AACGATCCGG TGGGAACGGC GGCCAATCCG ACGCCGCTCT CGATCCCGTG GGTTCTCGAA GACTATGTGG CCCGGCTCGC CGAGGCCGCG CGCCGGGTGA AATGA
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Protein sequence | MACHLLTSAV LVLVVASPLG AQEFPLTLDH AFGRTTIPER PVRVATVSWA NHEVPLALGV VPVGFARANF GDDDGDGLLP WVAGRLDDLG AEAPRLFDEG DGIDFEAVAA SKPDVILAAY SGLSQSDYDI LSEIAPVVAY RDAPWATDWR EMIRLNGTAM GLAAEGEALI ARIEGQIAEV TARHPELHGR TAMFVTHLDI RDLSVIRFYS ANDTRVKFFE DLGLASPASV RDASTGGGYS GEVSAERIDS FDDVDILVTY GGAALLERVR QNPLTSRMRA VSDGALVLLG NDPVGTAANP TPLSIPWVLE DYVARLAEAA RRVK
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