Gene Rsph17025_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3331 
Symbol 
ID5085822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp207903 
End bp208877 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID640484900 
Producttransport system permease protein 
Protein accessionYP_001169517 
Protein GI146279359 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.411353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.472078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGTC ATCTCCTCAC CTCCGCCGTC CTCGTCCTCG TCGTCGCGTC TCCGCTCGGG 
GCGCAGGAGT TTCCGCTCAC TCTCGACCAT GCCTTCGGCC GGACCACCAT CCCCGAGCGG
CCTGTGCGGG TGGCCACCGT CTCCTGGGCC AACCATGAGG TGCCGCTCGC CCTCGGCGTG
GTTCCGGTGG GCTTTGCGCG GGCGAATTTC GGGGACGATG ATGGCGACGG CCTGCTGCCC
TGGGTCGCCG GGCGGCTCGA CGATCTTGGC GCCGAGGCCC CGCGGCTGTT CGATGAGGGC
GACGGGATCG ACTTCGAGGC CGTGGCGGCC AGCAAGCCCG ATGTGATCCT TGCCGCCTAT
TCCGGTCTCA GCCAGTCCGA CTACGACATT CTCAGCGAGA TCGCCCCGGT CGTCGCCTAT
CGTGACGCGC CCTGGGCGAC CGACTGGCGC GAGATGATCC GGCTGAACGG GACCGCAATG
GGCCTTGCGG CCGAGGGCGA GGCGCTGATC GCCCGGATCG AGGGCCAGAT CGCCGAGGTC
ACCGCCCGCC ATCCCGAACT TCATGGCAGG ACGGCGATGT TCGTCACCCA TCTCGACATT
CGCGACCTGA GCGTGATCCG CTTCTATTCG GCCAATGACA CGCGGGTGAA GTTCTTCGAG
GATCTCGGCC TCGCCTCTCC CGCGAGCGTG CGCGACGCCT CGACCGGCGG CGGCTATTCC
GGGGAAGTCA GTGCCGAACG GATCGACAGT TTCGACGATG TGGACATCCT CGTGACCTAT
GGCGGCGCGG CGCTGCTCGA GCGCGTGCGC CAGAACCCAC TGACCTCGCG GATGCGTGCG
GTGTCGGACG GCGCGCTCGT GCTGCTGGGC AACGATCCGG TGGGAACGGC GGCCAATCCG
ACGCCGCTCT CGATCCCGTG GGTTCTCGAA GACTATGTGG CCCGGCTCGC CGAGGCCGCG
CGCCGGGTGA AATGA
 
Protein sequence
MACHLLTSAV LVLVVASPLG AQEFPLTLDH AFGRTTIPER PVRVATVSWA NHEVPLALGV 
VPVGFARANF GDDDGDGLLP WVAGRLDDLG AEAPRLFDEG DGIDFEAVAA SKPDVILAAY
SGLSQSDYDI LSEIAPVVAY RDAPWATDWR EMIRLNGTAM GLAAEGEALI ARIEGQIAEV
TARHPELHGR TAMFVTHLDI RDLSVIRFYS ANDTRVKFFE DLGLASPASV RDASTGGGYS
GEVSAERIDS FDDVDILVTY GGAALLERVR QNPLTSRMRA VSDGALVLLG NDPVGTAANP
TPLSIPWVLE DYVARLAEAA RRVK