| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3314 |
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| Symbol | |
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| ID | 5085805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 187044 |
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| End bp | 189023 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640484886 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169503 |
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| Protein GI | 146279345 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.164525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.326737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGAT CGGGGGCGCC AGTGCGGGAG AGGTTGCGCA AGGTCCGGGA GGCGATCCTC
CGGGCCGTAA CGCTGCAACC CAGTCCCGAA GACGCCGCCA GCGTGGTCGG CGGGACCGCT
GCGGGGGCTT CGGTCACGGC CGTCAATGCG GTGGTCTATG CGGCCGCGAC GGTCGGGGCG
GACAATGCGC TCTTCACGAC GCTCTGGTTG TCGGTGGTCT TCGCCCTCTG CATGGTCTTC
GTGCGCATGT CCTCCAGGGC CGCCGGCCGG AAGATCACGC GCGTATCCCG GCGCGCGGCC
CGCCGGCTGG TTCTGACCTC GATCCTGCTG GCCGCGCCCT GGGCCGCCCT GCCGATCCAT
GTGGTCGCCT TTCATGGCGC GGGCGACGAG ATGCTGGTGC TGCTCGTCTG CACGGGGATG
CTGTCGGGGG GCGCCTTCAT GCTCCACCGC GCCTTCGTCG CCTCGCTCGC CTATGTCTGG
ACGATCCTCC TGGCCGTCAT CTTCTCGTTC CAGTTCGGCG GATGGGCGGC CGCCTGGCCG
GTCACGGCCT ATGCGATCGT CTATGGCTCC TACCTTGCCT ATTTCACCTA TACGGCCGGG
CGGACGGCCC GGCAGCGCGA CGAGTCGGTG GCCGCCCTTT CCGACGCGGT CCAGAGCCTG
CAGCAGGCTC GGGACGAGAA CCATCGGCTG GCCAACATCG ACTTCGCGAC GGGGCTTCTG
AACCGCAAGG CCTTTCACGA GGCCCTGCAG GCCTCCGTCG CCCATGAGGC GCTGTCGCGA
GAGCCGTTCG GCCTGCTCCT GCTGGATCTC GACCGATTCA AGACCGTGAA CGACCTCTAC
GGGCACGGGG TCGGCGACAA GCTGCTGGCC GAGCTTGCAC AGCGCCTGCG CGGGGCGCTG
GCGCGCAGGG ACATCATCGG CCGGGTGGGC GGCGACGAGT TCGCGGTGAT CCTGAGGGAT
GTGGCCGACG CCGAGACGAC CGCGGCGGTG AGCGGCCGGT TGCTCAAGGA ACTGAACCGC
CCCGTCCGGC TCGGCGGCCC GATCATCCGT TCGGGCGCCT CGATCGGCGC GGCCCTCTGC
CCCGGCGACG GAAGGGATCC GGCCGACCTC ATGCTGAAGG CCGATCTGGC GCTGAACCGC
GCGAAGGAGG AGGGGCGCGG CCGCGCGATG CAGTTCGACA TCCACCTCCA GCGCCGCGCG
GCGGAGGTGG ACGGCATCGA GGCCGGCCTG CGCGCCGGAC TGGATGCGCG AACCTTCAGG
GTTCTCTACC AGCCCCAGTT CTCGCTGTGC GACGGCGGCA TCGTCGGCGC CGAGGCTCTC
GTGCGCTGGC CCGAGGACGG TCCCGACGCG CCCTCGCCCG AGCGGTTCCT CGGCGTGGCC
TCGGAGCGCG GGCTGCTGCC CGCCCTGTCG CGCCTGATCG CCGAGACGGT GGCCGAGGAC
ATCGGCCGAT GGCGCCGGCA GGGCGTCCGT GCGCCGAAGA TCGCCCTCAA CCTGCATCCC
GACGACGTCA AGTCGCCCGA GACGCTGCTC GAGACCATCG ACATGTTCGA GACCCGCGGG
ATCACCGGCC AGCACCTCAC GCTCGAGATC ACCGAGGAAT GTCTCGTCGG CCGGGGGACG
GATGGCGCGG CGGAGGTGCT CGAGCGGCTG GTCGGACGGG GCTTTGGCCT GTCGTTCGAC
GATTTCGGCA CCGGACATGC CTCGCTCTCG CATCTCAAGA AGGTGCCCGT GACCGAGATC
AAGATCGACC GGCAGTTCGT GGCGGGCCTG GCCGAGCGGC GCGACGACCG CGCCATCGTC
GCGGCCATCG CCGAGATCGC GCGGGGGATG GGGCTGCGCT CGATCGCCGA GGGGGTCGAG
ACCGAGATCC AGCGCCGCAT CCTGACCGAA CTTGGCATCG AGGCGGGGCA GGGGTTCCTC
TGGTCGGCTC CGGTCTGCTC CGGACGGCTT GCCGGGATGC TCGGCGGCGC GGGCCGCTAG
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| Protein sequence | MIRSGAPVRE RLRKVREAIL RAVTLQPSPE DAASVVGGTA AGASVTAVNA VVYAAATVGA
DNALFTTLWL SVVFALCMVF VRMSSRAAGR KITRVSRRAA RRLVLTSILL AAPWAALPIH
VVAFHGAGDE MLVLLVCTGM LSGGAFMLHR AFVASLAYVW TILLAVIFSF QFGGWAAAWP
VTAYAIVYGS YLAYFTYTAG RTARQRDESV AALSDAVQSL QQARDENHRL ANIDFATGLL
NRKAFHEALQ ASVAHEALSR EPFGLLLLDL DRFKTVNDLY GHGVGDKLLA ELAQRLRGAL
ARRDIIGRVG GDEFAVILRD VADAETTAAV SGRLLKELNR PVRLGGPIIR SGASIGAALC
PGDGRDPADL MLKADLALNR AKEEGRGRAM QFDIHLQRRA AEVDGIEAGL RAGLDARTFR
VLYQPQFSLC DGGIVGAEAL VRWPEDGPDA PSPERFLGVA SERGLLPALS RLIAETVAED
IGRWRRQGVR APKIALNLHP DDVKSPETLL ETIDMFETRG ITGQHLTLEI TEECLVGRGT
DGAAEVLERL VGRGFGLSFD DFGTGHASLS HLKKVPVTEI KIDRQFVAGL AERRDDRAIV
AAIAEIARGM GLRSIAEGVE TEIQRRILTE LGIEAGQGFL WSAPVCSGRL AGMLGGAGR
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