Gene Rsph17025_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3296 
Symbol 
ID5085787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp169259 
End bp169939 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content73% 
IMG OID640484868 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_001169485 
Protein GI146279327 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.73998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.765394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCC GATCCCGGCT TGCACTGCGG GCTCGGCTGG CCGACGCTGG GGCCGATCCA 
CCCGAGGTGC CCATGTCCCG ACCCATCATC GCCATCCTGC GCGGCATCAC GCCCGCGGAA
GCCGAGCCCG TCGCCGAGGC GCTGGTGGAG GCGGGGATCG AACGGATCGA GGTGCCGCTC
AACTCGCCCG AAGGGCTGGA GAGCGTCGCG CGACTCGTCC GCCGCCTTGG CGACAGGGCG
TTGATCGGGG CAGGCACGGT GTTGTCGCCC GAGGATGTGG CCCGTGTGGC GGCAACCGGG
GCGCGGCTCG TCGTCTCGCC CGACTGCAAC CCCGAGGTCA TCACGGCCAC GCGGGCCGCG
GGGCTCATCT CGATCCCGGG CGTCTTCACC CCGACCGAGT GCTTCGCGGC GATCCGGGCG
GGCGCCAACG CGCTCAAGCT CTTTCCGGCT GCGCTTCTCG GGCCTGCGGG ACTCGAGGCG
CTGAGGGCGG TCCTGCCGCG TGATCTGCCG GTCTTTGCCG TGGGGGGCGC CGGAGAGGCC
AATCTGCAGG ACTGGCGCAA GGCGGGGGCC GACGGCTTCG GGATCGGCAC GGCCCTCTAC
CGCCCCGGTC GCAGCGCCGC GGAGGTGGCC GAACGGGCCC GGACGCTCGT TGCGGCCTTT
GACCGGAGCA GCGCGCCATG A
 
Protein sequence
MRTRSRLALR ARLADAGADP PEVPMSRPII AILRGITPAE AEPVAEALVE AGIERIEVPL 
NSPEGLESVA RLVRRLGDRA LIGAGTVLSP EDVARVAATG ARLVVSPDCN PEVITATRAA
GLISIPGVFT PTECFAAIRA GANALKLFPA ALLGPAGLEA LRAVLPRDLP VFAVGGAGEA
NLQDWRKAGA DGFGIGTALY RPGRSAAEVA ERARTLVAAF DRSSAP