Gene Rsph17025_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3269 
Symbol 
ID5086018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp139691 
End bp140608 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID640484841 
Productinner-membrane translocator 
Protein accessionYP_001169458 
Protein GI146279300 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC TCCTGATCCT CCAGGGCCTC AACGGTCTGC AGTTCGGCAT CCTGCTGTTC 
CTTGTGGCGG CGGGCTTGAC GCTGGTCTTC GGGGTGATGG ATGTCATCAA CCTCGCGCAT
GGCTCGCAAT ACATGGCGGG CGCCTATCTG GCCGCGGCTT TCGCGGGGCT GACGGGCAGC
TTCCTTCTGG GCCTCCTCTG TGCGGTGCCG CTCGCCCTGG CCTTCGGGCT GATCCTCGAG
CGGCTGGTGA TCCGAAGGCT CTACGATCGC AGCCACCTCG ATCAGGTGCT CGTGACCTTC
GGGCTCATGC TCATGCTGAA CGAGGGCGTG CGCCTGCTCT GGGGCTCGGC GCCCATCTCG
GTCGAGATGC CGGAGGCGCT TTCGGGCTCG ATCCCGATCT GGGGCAACCT GCGCTATCCG
GTCTATCGGC TGGCGATCCT GGCCGCGGGA CTGGGGGTGG CCGCTGCCCT CTGGTGGGCC
ATCCACCGGA CGCGGATGGG GATGCTGCTG CGCGCGGGCG CCTCGAACCG GGCCATGGTC
TCGGCCCTCG GGACCGACAT CAACCGGCTG TTCCTGCTGG TCTTCGGAGC GGGGGCGATG
CTCGCGGGAT TTGCGGGCGC CATGATGGTG CCCGTCGTCT CGGCCGAGCC GGACATGGGC
GACACGGTGC TGATCCTCAC CTTCGTGGTG ATCGTGATCG GCGGGATCGG CTCGATCCGC
GGCGCCTTCG TTGCGGCGCT TCTGGTGGGG CTGGTGGACA CGCTTGGCCG CACCTTCGGC
CCGATCCTGC TCCGCAGCCT GATGGAGCCC GACGCGGCGA GCCAGACGGG GCGGACGCTC
GCCCCCATGC TCATCTACAT CCTGATGGCC GCGATCCTCG CCGTCCGGCC CGCGGGCCTC
TTTCCGGTGC AGAGATGA
 
Protein sequence
MTNLLILQGL NGLQFGILLF LVAAGLTLVF GVMDVINLAH GSQYMAGAYL AAAFAGLTGS 
FLLGLLCAVP LALAFGLILE RLVIRRLYDR SHLDQVLVTF GLMLMLNEGV RLLWGSAPIS
VEMPEALSGS IPIWGNLRYP VYRLAILAAG LGVAAALWWA IHRTRMGMLL RAGASNRAMV
SALGTDINRL FLLVFGAGAM LAGFAGAMMV PVVSAEPDMG DTVLILTFVV IVIGGIGSIR
GAFVAALLVG LVDTLGRTFG PILLRSLMEP DAASQTGRTL APMLIYILMA AILAVRPAGL
FPVQR