Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3258 |
Symbol | |
ID | 5086007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 126927 |
End bp | 127913 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640484830 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001169447 |
Protein GI | 146279289 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.504084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.478184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA CCAGAGGGAT GCCGGCGCTG CTGGCGGGCT GCCTTGTCCT TGCCGCCGGG GCGCTGCCGG CCGCGGCGCA GCAATACACG CTGCGGCTCA ACCACGTCCA CAGCCCGTCC GAGCCCTATC AGCAGGCCTT CACCAACTGG GCCGAGCGGG TCAAGGAGCG CACGGACGGC AACCTCGTGA TCGAGGTCTT CCACAGCGCC CAGCTCGGCG TCGAGGAGGA TATCATCGAG CAGATCCGCA TGGGCGCCAA TGTCGGCCAG AACACCGACG CGGCCCGCCT TGGCAACTAT GTCAAGGAGA TCGCGGTCGT GAACGGCCCC TATTTCGTGG ACACGCTGGA GGACGCCTTC CGCCTGTCCG ATCTCGAGAT CATGAAGGAA TGGGAAGAGC GCCTTGCGCG CGAGGCGGGA ATCCGCATCG TCTGCTCGGA CTTCGTGCAG GGCAAGCGGC ATTTCTTCAC CAACCGGCCG GTGCAGGCGC CCGCGGATCT CTCCGGCCAG CGCATCCGCA CCCCCCCGGC GCCGATCTGG CAGGAATCCG TCCGCGCCCT GGGCGCGCAG CCGACCGCGA TGAGCTATGG CGACATCTAT CCCGGCCTGC AGCAGCGCGC GGTGGACGGG GCCGAACTCA CCTTCACCAA CGTCGTTGCG GGCAATTTCA ACGAGGTGCT GACCCACTTC TCGGAAACCG GGCACATCCT GCTCAAGAAC TACGAGATCG TGAGCGCGCA ATGGTTCGAC AGCCTGCCCG CCGACTACCA GACCGCGCTG GTCGAGGAAT GTCGCACGGC CGGGCAGGAG GTCTCGCGCC AGCTTGAGGA GATGGCGGCG GCGGACCGTC AGAAGCTGGT CGATGCCGGC ATGACCCCGG CCGAGGATGT CGATCTCGAG GCGTTCCGCG AGGCGGGCCT CGGAGCCTAC GAGGCGCTCG GCCTGACCGA GGCGCGGCAG GCGGTGCTGG ACGAGCTGGG CCGCTGA
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Protein sequence | MTKTRGMPAL LAGCLVLAAG ALPAAAQQYT LRLNHVHSPS EPYQQAFTNW AERVKERTDG NLVIEVFHSA QLGVEEDIIE QIRMGANVGQ NTDAARLGNY VKEIAVVNGP YFVDTLEDAF RLSDLEIMKE WEERLAREAG IRIVCSDFVQ GKRHFFTNRP VQAPADLSGQ RIRTPPAPIW QESVRALGAQ PTAMSYGDIY PGLQQRAVDG AELTFTNVVA GNFNEVLTHF SETGHILLKN YEIVSAQWFD SLPADYQTAL VEECRTAGQE VSRQLEEMAA ADRQKLVDAG MTPAEDVDLE AFREAGLGAY EALGLTEARQ AVLDELGR
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