Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3255 |
Symbol | |
ID | 5086004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | + |
Start bp | 124145 |
End bp | 124939 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484827 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001169444 |
Protein GI | 146279286 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0843233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.231576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATGCAA GCATACTAGC GTTTCTGCGA ACAGAGGCTT TGGGAGGGGC GGCTGTGACG CGGGAGGAGC GCAAGGCGGG CACGTTCGGG GCTGCGGGGG GCAACCTGCG CCCGGTCTCG GCCGGTCGGC TTGACGTGGG CATCTCCGAT GAGATCCGCC GTCGCATCGT CAGCCTCAAC TATCCGCCCG GCCTCATGAT CTTCGAGAAT GCGGTGGCCG CGGAATTCGG CGTCAGCCGG ACGCCGGTGC ATCAGGCCTT CATGCGCCTC TCGCACGAGG GGCTTCTGGA TGTGCTGCCG CAACGAGGGG CGCGGGTCTC GTTCCTGTCG CGCTCGACCA TCATCCACGC TCAATACGTC CGAGAATGCC TTGAAGCGGC AGCATTTTTC GACGCCGCCC GCATCTGGGA CGCGGCGGAC GCCGCCCATC TTCAGCGCGA GCGCCGCGCG CAGGATCTGA TCGAGGCGCA GCGCGAGGCG GTCGCCCGAG GCGACTACCT GCGCTTCACC GAACTGGATG TGGCCTTCCA CACCGAGATC CTCGGGGTGC TGGGCAACGA CCTCCTGCTC GCCTGCGTCT CGCAGATGCG CAACCAGCTC AACCGTCTGC GGCTGCTGGA ACTGCGCGAA GCCCATCACG AAAAGCGCAT GATCGCCGAC CACGAGGCGC TTCTGGCCGC CGTATCGGCT GGACGCGCCG ACGAGGCGCG ACGGCGGCTC ATCACCCACC TCAAGACCCT GGAAGATTTT CGGGAAGAGA TTTTCGGTCG CCATCCCGAC CTCTTCCGTC CCTGA
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Protein sequence | MHASILAFLR TEALGGAAVT REERKAGTFG AAGGNLRPVS AGRLDVGISD EIRRRIVSLN YPPGLMIFEN AVAAEFGVSR TPVHQAFMRL SHEGLLDVLP QRGARVSFLS RSTIIHAQYV RECLEAAAFF DAARIWDAAD AAHLQRERRA QDLIEAQREA VARGDYLRFT ELDVAFHTEI LGVLGNDLLL ACVSQMRNQL NRLRLLELRE AHHEKRMIAD HEALLAAVSA GRADEARRRL ITHLKTLEDF REEIFGRHPD LFRP
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