| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3248 |
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| Symbol | |
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| ID | 5085997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 116117 |
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| End bp | 117559 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640484820 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169437 |
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| Protein GI | 146279279 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.713925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.212703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGG CTCCGCCCGA AAGCGTCGCC GGCGAGCATT TCGACGTGGT GATCGTGGGC
TCGGGCTTCG GCTCTTCCTT TTTCCTGCAC AGGCTGATGC GGCAGCCCGG CCGGCGGGTG
CTCGTCCTTG AATGGGGCGG TCACGCGACG CATGACTGGC AGCTTGACGA GGGCCGGAAC
TCGTCGGTTG CCGACAGCGA CACCTATGCC ACCAACTCCG ACAAGCCCTG GAACTTCACC
GTCGGGTTCG GGGGCGGCAC GAACTGCTGG TTTGCCCAGA CGCCCCGGCT TCATCCGGCC
GATTTCCGGC TGGGAACCGA TCATGGCGTG GCGCCGGACT GGCCGATCAC CTACGACGAT
CTCGAGACCT ACTGGTGCGA CGCGGAAGAG ATCATGGCGG TCTCCGGCGA TCCCGACATG
GCGCGCGTCA TGCCGCGCTC GCGTCCCTTC CCGCAGCCGC CCCATCGGAT GCCCGATCCC
GACCGGCTGA TGAAGGCGGC CCGCCCCGAC AGCCACTTCG TCATGCCGAC GGCGCGGGCC
CGGATCGCCA CCGAGACGCG GGCCGCCTGC TGCGCGTCGC TGCGTTGCCA GATCTGCCCC
GCCGACGCCA AGTTCACCGC CAACAACTCG CTCGTGCCGC TCTATGAGGC CGAGGGCGTC
ACGCTCTGTC TTGAGGCCGA GGTGCGCCGG TTCGAGGCGG CGGGCTCGTC CATCTCGGCC
GCCGTGTTCC GGGGCTCGGA CGGGCGCGAG CACCGCGTGA CGGGGGATCT CTTCGTCCTT
GGCGCCAATG CGATCCACAG CCCCGCGATC CTTCTCCGGT CCGATCTGGG GGGCGGGCTG
ACGGGTGTGG GGCTGCATGA ATCCTACGGC TGGTCGATGG AGGCCTGGCT CGACGGTGTG
GAGAATTTCG GCGGCAGCAC CATCACGACC GGCCTCGACT TCGGCCTCTA TGACGGGCCG
CACCGCAAGA CCGAGGGCGC CGCGCTGGTC TATTTCGAGA ACCGCTGGTC GCACGGGATG
CGCCTTGGCG CCGAGCGGAT GCGCCAGACG CTGCCGCTGG TGATCGTGAC CGAGGATCTG
CCGGAAAACA GGAACCGCGT GACGCTCGAC GGTGAGGGCG GGGCCTTCGT CGAGTATCAC
GGGCCGTCGG ACTATGCGCT GCGCGGGATG GAGCGGGCGA AGGCCGCGCT GCCGGATCTG
TTGGCGCCGC TGCCGGTCGA GCGGATCCTC GACCACGGCA TCCGCGAGAC GGAGTCGCAT
CTGCAGGGCA CGCTGCGGAT GGGCCACGAT CCGGCCACCT CGGTCGTCGA TGCGGGGCTC
GTGCATCACC GGCTGCGCAA TCTCGTCGTG GTGGGGACGA GCACCTTCCC CACCTGCTCG
GCCGCCAATC CCTCGCTGAC CGCCGCGGCG CTTTCGCTGC GCGCGGCCGA CCTGCTGATC
TGA
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| Protein sequence | MNLAPPESVA GEHFDVVIVG SGFGSSFFLH RLMRQPGRRV LVLEWGGHAT HDWQLDEGRN
SSVADSDTYA TNSDKPWNFT VGFGGGTNCW FAQTPRLHPA DFRLGTDHGV APDWPITYDD
LETYWCDAEE IMAVSGDPDM ARVMPRSRPF PQPPHRMPDP DRLMKAARPD SHFVMPTARA
RIATETRAAC CASLRCQICP ADAKFTANNS LVPLYEAEGV TLCLEAEVRR FEAAGSSISA
AVFRGSDGRE HRVTGDLFVL GANAIHSPAI LLRSDLGGGL TGVGLHESYG WSMEAWLDGV
ENFGGSTITT GLDFGLYDGP HRKTEGAALV YFENRWSHGM RLGAERMRQT LPLVIVTEDL
PENRNRVTLD GEGGAFVEYH GPSDYALRGM ERAKAALPDL LAPLPVERIL DHGIRETESH
LQGTLRMGHD PATSVVDAGL VHHRLRNLVV VGTSTFPTCS AANPSLTAAA LSLRAADLLI
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