Gene Rsph17025_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3234 
Symbol 
ID5085983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp97341 
End bp98846 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content68% 
IMG OID640484806 
Producthypothetical protein 
Protein accessionYP_001169423 
Protein GI146279265 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.851144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTCCG AAACCAGCGT CTTCGATCCG CCGGAAGGCG TGCTTCGCGC CACGGCAAGC 
CGGGGCGCCG TGGCGACCAT CGCCTCGCAG GGGGCGCTGA TGCTGACCCA GATCGGCTCG
GTCGTGATCC TCTCGCGGCT GCTCTCGCCC GAGGATTTCG GCCTCGTCGC GATGTGCACG
CCCGTCATCG CGCTGCTGAT GATGCTTCAG GATTTCGGCC TGCTGGCCGC GACGGTCCAG
AAGCAGGGGC TGAAGACCGA GGAGGTGAAC TTCCTCTTCT GGATCAATGT CGCGCTGAGT
GTCTCGCTCA CGCTGATCCT GCTGGCGACC TCGCCGCTGG TGGCGATGTT CTACCAGGAG
CCGCGGGTGG GGCCGCTGAT TGCGGCGCTC TCGGTCACGA TCGCGCTGAA CGGGCTCGGG
GCCCAGCACG CGGCGCTGCT GATCCGGCGG ATGCAATATG TGCGCCTCGG CTTCATCCAG
GTCGCAGGGG CCGTGCTGTC GCTGGCGACC GCCGCGATCT GGGCCTGGAT AGATCCGAGC
CCGTGGGCGC TGTTCGGCGG GGCTCTGGTG GGAACGCTCG TGCCGACGCT CGGCATGTGG
CTCGGCTCGC GCTGGCGGCC GGGGCTGCCG CGGCGCATCG AGGGGTGGCG GCCGCTCCTG
AACTTCGGCG CGGGCGTCAC CGGGTTCAAT TTCGCCAACT TCTTCTCGAT GAACGTGGAC
AAGGTGGTCA TCGGCCGGGC CTTCGGCGGC GAGTCGCTGG GCTACTACGA CCGGGCCTTC
AAGCTGGTTC TGATGCCCTC GAACTCGATC TTCAACCCGC TTGCGCGGGT GATGGTGCCT
GCCCTGTCCC GCCTTCAGGA CGAGCCGGAC CGCTATCGGA GCGCCTATCT CCGGGTCGCG
GGGCTGCTGC TCTTCCTTCT GCTGCCGATG ATGGCCTGCG CGGCCGCCTT TGCCGACATC
GTGATCCCGC TGGCCTTCGG CCAGAACTGG GATGGCAGCG TGGCGATCTT CACCGCGCTC
GGGATCGCCG GCCTGGTGCA GCCGCTGAAC AATGTGGCGG GCTGGCTGTT CCTCAGTCAG
GGCCGGTCGA GGGACTTCTT CCACTCGGGC CTGATCCACG CCCTCTTTGT CGGCACGGCG
GTGCTGGCGG GCCTGCCGTT CGGGCTGGTC GGGGTCGTCG TTGCCGTGGC GATCGCCGAA
TATCTGAAGG TGCCGGCGAT CTGGGCCCTG ACCTGCCGCA GCGGCCCGAT CCGCTATCGC
GACATGATCC GCAGCGTGGG ACCGCTGGTT CTGTCGGTGC ATTTGGTCAT GGGGCTGCTG
TGGCTCGCCA AGCCCCACCT CCCCGGTCCG GGCCTTGCGG CGCTGCTGCA GGGGGGCCTT
TTGTCCTATG CGCTGACGGC CCTGATGATC TCGGCCACAT CGGCGGGACG CGAGACGCTG
CGCGAGGGTT GGCGGCTTGT GGCCGAGAAG ATGCCCCTGC GGCGCCGGAT GGTGGCCGGG
ACGTGA
 
Protein sequence
MTSETSVFDP PEGVLRATAS RGAVATIASQ GALMLTQIGS VVILSRLLSP EDFGLVAMCT 
PVIALLMMLQ DFGLLAATVQ KQGLKTEEVN FLFWINVALS VSLTLILLAT SPLVAMFYQE
PRVGPLIAAL SVTIALNGLG AQHAALLIRR MQYVRLGFIQ VAGAVLSLAT AAIWAWIDPS
PWALFGGALV GTLVPTLGMW LGSRWRPGLP RRIEGWRPLL NFGAGVTGFN FANFFSMNVD
KVVIGRAFGG ESLGYYDRAF KLVLMPSNSI FNPLARVMVP ALSRLQDEPD RYRSAYLRVA
GLLLFLLLPM MACAAAFADI VIPLAFGQNW DGSVAIFTAL GIAGLVQPLN NVAGWLFLSQ
GRSRDFFHSG LIHALFVGTA VLAGLPFGLV GVVVAVAIAE YLKVPAIWAL TCRSGPIRYR
DMIRSVGPLV LSVHLVMGLL WLAKPHLPGP GLAALLQGGL LSYALTALMI SATSAGRETL
REGWRLVAEK MPLRRRMVAG T