| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3233 |
|---|
| Symbol | |
|---|
| ID | 5085982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 96855 |
|---|
| End bp | 97328 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484805 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169422 |
|---|
| Protein GI | 146279264 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.712863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAC TTCCCAGCGT TCTCTTCATC TGCCTCGGCA ATATCTGCCG CTCGCCGCTT
GCCGAGGCTG CGCTTCGCTC AGCCGCAGAC GGGCGAGGCG TGAGCCTGCA GGTGGACAGC
GCGGGGATCG GCGGCTGGCA TGCGGGCGAG GCCCCCGATC CTCGGGCGCA GCAGGTCGCG
CGGGCGAACG GCATCGACAT CGGCCATTAC CGCGCACGGC AGGTCCATCG GACGGACTTC
GTCGAATTCG ACCATCTCGT GGCGCTGGAT CTGGAAAACC TCGCGGAACT GCGCCGGCTG
CGGCCGTCGG GCGCTCGGGC CCGGCTGTCG CTTCTGCTCG ATCACGTCCC GGGGCGGGCC
GGCCAGCCGG TGGCCGATCC CTACTACGGC GGGCCGGAAG GCTTCCTCGC CACCTGGGCC
GACGTCACGG CCGGGGCGAA CGGGCTGCTT GCCGGGTTCC TCCGCCAGGC CTGA
|
|---|
| Protein sequence | MTQLPSVLFI CLGNICRSPL AEAALRSAAD GRGVSLQVDS AGIGGWHAGE APDPRAQQVA
RANGIDIGHY RARQVHRTDF VEFDHLVALD LENLAELRRL RPSGARARLS LLLDHVPGRA
GQPVADPYYG GPEGFLATWA DVTAGANGLL AGFLRQA
|
|---|
| |