Gene Rsph17025_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3218 
Symbol 
ID5085967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp82520 
End bp83224 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content63% 
IMG OID640484790 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001169407 
Protein GI146279249 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCA ACACTCCCCG CCCGGGTCTC CTGCGCCGGG TCTGGCACCT CCTTGTGTCT 
CCTTCCGGGA TCCTGTCGGT CGGCCTCCTC CTGATCGCCG GCTTTGGCGC GGGCATCCTG
TTCTGGGGCG GCTTCCATAC CGCCCTCGAG ATGACCAACA AGGAGAGCTT CTGCATCTCG
TGCCACGAGA TGAAGGACAA TGTCTTTGCC GAGTATCAGG GCTCGGTGCA CCAGAACAAC
GGCTCGGGCG TGCGCGCCAC CTGCCCGGAC TGCCACGTTC CCAAGGAATG GGGTCCGAAG
ATGCTGCGCA AGATCAAGGC CTCCAAGGAG CTGTACGGGC ACTTCATCAC CCATTCGATC
TCGACCCCCG AAAAGTTCGA AGAGCGGCGG ATCGAGCTTG CGGCAAACGA ATGGGCCCGG
ATGAAGAAGA ACGACAGTCA GGAATGCCGC AACTGCCACA GCTTCGGCTT CATGGATTTC
ACCATGCAGG AAAACCGCGC GGGCGCCGAT CACCAGCGCG CGCTGGACGA GGGCAAGACC
TGCATCGATT GCCATCAGGG CATCGCGCAC GACCTGCCCG CGAACTATCT CGACCGCTAC
GAGGAAGTGG TGGACGATCT CGAGACCCGC GGCGTCCTGC CCGCGCGCAA GGCGCCCGAC
CTGGCCGACA TCCGCAGCTT CCTTGGCACC GACACGGACG GCTGA
 
Protein sequence
MPSNTPRPGL LRRVWHLLVS PSGILSVGLL LIAGFGAGIL FWGGFHTALE MTNKESFCIS 
CHEMKDNVFA EYQGSVHQNN GSGVRATCPD CHVPKEWGPK MLRKIKASKE LYGHFITHSI
STPEKFEERR IELAANEWAR MKKNDSQECR NCHSFGFMDF TMQENRAGAD HQRALDEGKT
CIDCHQGIAH DLPANYLDRY EEVVDDLETR GVLPARKAPD LADIRSFLGT DTDG