| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3173 |
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| Symbol | |
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| ID | 5085658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 35217 |
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| End bp | 35876 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640484745 |
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| Product | Asp/Glu racemase |
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| Protein accession | YP_001169362 |
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| Protein GI | 146279204 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.471427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGG ACTGGGCCTT CGTCGCCGAG ATCATGCCGG TCCTGCTGCA GGGGCTGCAG
CTGACGCTGC TCATCACGCT TCTGTCGGCG GGGGTGGCGG CGGGGCTCGG GCTGGTCTTC
GCCATCGCCC GCCGTTCGCC CCGGGCCTGG ATCGCGCGCC CGGTGGGCCT GTTCGTCAGC
TTCATCCGCG GCACGCCGCT TCTGGTGCAG CTTTACTTCA TCTTCTACGT GCTGCCCGAT
GCGGGTGTCC TGCTGCCCCC CTTGGTGGCC GGCGTCATCG GAATGGGCCT GCACTACGCG
ACCTATGCCG CCGAGGTCTA TCGCGCGGGC ATCGAGAACG TGCCCCGCGG CCAGTGGGAG
GCGGCGCGCG CCACCAACCT GACCGCGGCC CAGACATGGC GGCATGTGAT CGTGCCGCAG
GCGATCCCGC CGATGATCCC GGCGCTCGCC AACTACCTGA TCGCCATGTT CAAGGAGACG
CCGCTGCTGT CGGCCATCAC TGTCCTTGAA CTGATGAACC AGGCGAAGTC GGTGGCCAAC
TCCAGCTACC GCTATGTCGA GCCGATGACG CTGGTGGGCG TGCTGTTCCT GGCCATGAGC
CTCGTCTCGG TCGTGCTGCT GCGCTGGCTT GAACATCGCT ACGGAAGGCT TGCGAAATGA
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| Protein sequence | MEWDWAFVAE IMPVLLQGLQ LTLLITLLSA GVAAGLGLVF AIARRSPRAW IARPVGLFVS
FIRGTPLLVQ LYFIFYVLPD AGVLLPPLVA GVIGMGLHYA TYAAEVYRAG IENVPRGQWE
AARATNLTAA QTWRHVIVPQ AIPPMIPALA NYLIAMFKET PLLSAITVLE LMNQAKSVAN
SSYRYVEPMT LVGVLFLAMS LVSVVLLRWL EHRYGRLAK
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