| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3163 |
|---|
| Symbol | |
|---|
| ID | 5085648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 25174 |
|---|
| End bp | 26016 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484735 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001169352 |
|---|
| Protein GI | 146279194 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.517185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCT CGCTGCTCTA CGTGCCGGGC AACACGCCGC GCTTTCTGGA AAAGGCCGGC
CAGCGCGGCG CCGATGCGGT CATCATCGAC CTCGAGGATG CCGTTCCCGA GGCGGCCAAG
ACCGGGGCGC GCGAGATGCT GGCCCGATCG GTGCCGATGG TGGCGGCGGG CGGTGGGCAG
GTCTTCGTCC GCGTGAACAT GTCCGACCGG CTTCTTGACG ATGCCGTGGC GGCCACGCAG
GCGGGGGCGG ACGCGCTCTA CCTGCCCAAG GTCAATGACG TGGCGCTGCT GCATCGGCTG
GCGGAGCATC TGGCCCCGTT CGAGGGCGGT CGCGCGCCCA TGGGCTTCGT GCCGCTGATC
GAGGACCCCG AAGGTCTCTT CGAGGCCCGT GCCATCGCAA GGGGGCCGCG CGTCCTTGCG
CTCTCGGCCG GCGGAGAGGA TCTCGCCACC TCGATGGGCG CGAAGCCCAC GCCCGAGGTG
CTGCGCCAAC CCAAGCTCAT GATCCATTAC GCCGCCAAGG CCGCGGGTGT GATGTCCTTC
GGCCTGTTCC GCTCGACCGC CGACTTCTCC GACACCGACG CCATCCGCGC GGCGGCGCTC
GAGGCCCGGG ATTTCGGCTT CGACGGGGCC AGCTGCATCC ATCCGGCGGT GGTGCCGGTG
CTGAACGCGG CCTTCAGCCC CTCGCCGGAG GAGCTCGACT GGGCCCGCCG CGTGGTGGCG
GCCAGCCGCG AGGAGGCGGC CGCCGGACGC GGCGCCTTCA CGCTGGAGGG CCGGTTCATC
GACCTTCCCA TCGTGACCCG CGCCGAAAGG CTGCTCACCC GCTTCGACAA GGACCAAGCA
TGA
|
|---|
| Protein sequence | MIRSLLYVPG NTPRFLEKAG QRGADAVIID LEDAVPEAAK TGAREMLARS VPMVAAGGGQ
VFVRVNMSDR LLDDAVAATQ AGADALYLPK VNDVALLHRL AEHLAPFEGG RAPMGFVPLI
EDPEGLFEAR AIARGPRVLA LSAGGEDLAT SMGAKPTPEV LRQPKLMIHY AAKAAGVMSF
GLFRSTADFS DTDAIRAAAL EARDFGFDGA SCIHPAVVPV LNAAFSPSPE ELDWARRVVA
ASREEAAAGR GAFTLEGRFI DLPIVTRAER LLTRFDKDQA
|
|---|
| |