Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3127 |
Symbol | |
ID | 5083325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3203123 |
End bp | 3203911 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640484699 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001169316 |
Protein GI | 146279157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.24469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00159144 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCTTCA CCCTCGCCAC CTGGAACATC AACTCGGTCC GCCTGCGCGA GGCGCTGGTC TCGCGGCTGC TGACCGAGGA GATGCCCGAC ATCCTCTGCC TGCAGGAATG CAAGAGCCCG GTCGAGAAGA TGCCGCTCGA GGCGTTCCGG GCGCTCGGCT ACAACTGGTG CGTGGCGCGC GGGCAGAAGA GCTACAACGG CGTGGCGATC CTGTCGAAGC TGCCGCTGGT CGATGCGGGC GATCACGACT TTGCCGATCT GGGCCATGCG CGCCATGTCT CGGCGACGCT CGGGAACGGG GTCACGATCC ACAACTGCTA TGTGCCCGCC GGCGGCGACA TCCCCGACCG CGAGCAGAAC GTGAAGTTCG GGCAGAAGCT CGACTACCTC ACCCGGATGC GCGACTGGTG CCGGTCCGAC ACGCCGCGCA AGGCCATCCT CGTGGGCGAC CTCAACATCG CCCCGCGCGA GGATGATGTC TGGAACCACA AGGCGCTCCT GAAGATCGTG AGCCACACGC CGATCGAGGT GGACCATCTG AACGCTCTGA TGGAGGCCGG CGCCTGGATC GACGTGACCC GCAAGGACCT GCCTGAAGGG CGGCTCTATT CCTGGTGGTC CTACCGTTCG CCGGATTGGG AGGCGGCCGA CAAGGGCCGG CGGCTCGACC ACATCTGGGC CACACCCGAC ATTGCGAACG CAGCCCACGG CAGCCGCATT CTCCGCGCGG CCCGAGGCTG GCTGCAACCC TCCGACCATG CGCCGGTGTT CGCGACCTTC GATCTCTGA
|
Protein sequence | MTFTLATWNI NSVRLREALV SRLLTEEMPD ILCLQECKSP VEKMPLEAFR ALGYNWCVAR GQKSYNGVAI LSKLPLVDAG DHDFADLGHA RHVSATLGNG VTIHNCYVPA GGDIPDREQN VKFGQKLDYL TRMRDWCRSD TPRKAILVGD LNIAPREDDV WNHKALLKIV SHTPIEVDHL NALMEAGAWI DVTRKDLPEG RLYSWWSYRS PDWEAADKGR RLDHIWATPD IANAAHGSRI LRAARGWLQP SDHAPVFATF DL
|
| |