Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3103 |
Symbol | |
ID | 5083301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 3181168 |
End bp | 3183195 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640484675 |
Product | AsmA family protein |
Protein accession | YP_001169292 |
Protein GI | 146279133 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.596916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.117573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGCGGC CCATGGCGAC GGCTAGGCTT TCGGCGGAAC GATCGGAGGT GTCGATGCGC TGGCTGATCC GTCTGGTGGC TGTGCTCTTC GGGCTCGTGG CCCTGTTTCT CGTGGCGCTG GTGCTCGTGC CGCGCGACCG GCTGGCCGAG CTGGCCGTCC GCCAGTTCGA GGCCGCGACC GGCCGTGCCA TGACCATCTC CGGCGAGGTG CGCCCCTCGG TCTGGCCGAA GCTCGGCGTG CGCACCGGCC CGGTGACCAT TGCGAATGCC CCCTGGGCTG CGGGCGAGCC GTTGCTCGAG GCGCGCGCGC TCGAGATCGG GCTCGATACG CTCGCCTTGA TGGGCGGCAG CTGGCGGATC AGCCGGGTCG CGCTGGACGA GCCGGTGATC CGTCTCGAGC GCGATGCGGA GGGGCGGGCG AATTGGGACC TGTCGCGCCC GGCGGCGGCC GATCCTGCGC CCGAGGCTGA TCCCTCGCCC GCCACGGCCG CGGGATCGGC CGTGTCCCCC TTCACGCTCG ACGAGGGCAT CGTGACGGGC GGGCGGGTTC TCTGGATCGA TCACGGCACC GGGCGACGGG GGGACATCTC CGGCGTGCAG GCGCGGGTGA CCCTGCCGGA ATCGGGCGGA CCGGCCGATC TCACCCTCTC GGGGCAGGCG AATGGCCGGG GCTTTGCCGT CGAAGGCCGG CTCGAGGAGG CGGGCAGCGC ACTGGCCGGC CGGGTGGCGC CGTTGCGCCT GTCGCTCGCC ACGGGCAGCG CCCGGATCAC CTTCGAGGGC GAGGCCGGCA GCGCGCCGCC GATGGCCGAC GGGCGGATCG ACGCGGCCCT GGGCGATCTG GGCGATCTGG CGGCCCTCTT CGGCCGGCCC CGCCCCGAGC TGCCGGAAGG GCTGGGCCGC CGTCAGCTCG ATATCGCGGG CCGGCTCACG CTGGCCGAGG GAGGGACGCT GCATCTGCGC GAGGGCCGGG TGACCGCGGA TGGCAACCGG CTGGCCGTCG AAGCCGACAT GACCCCCGGC GGCGATCGCC CGAAGCTCGA GGCGAATGTG CGGGCCGAGG CGCTCGATCT TGCCGGCCTC CCGGCACCGG CCGCAGCCGC GGGCCCGCCC GGCGACGGCC GGCAAGGCTG GTCACGCACC CCGATCGACG CGAGCGCGCT GTCGGCGGTG GATCTCGGTC TGGCCCTCTC GGCGGGCAGC ATCGACCTCG GCCGGCTCAG GCTGGGCGCC ACCAAGGCGA TCCTGACGCT CGACCGGGCG CGGCTGGTGG TGGATCTGCG CGAGGTGGCC GCCTACGGCG GCAGTCTCGC GGGCGAACTG GTGGTGAACG GGCGCCAGGG CCTCTCGCTC GCGGCCGACC TGACGCTGTC GGGCCTGCAG ACCGAGCCCC TCCTGGCCGA TCTGGCGGAG TTCGACCGGC TGGCGACGCA AGGGGACGTG CGGCTGAAGC TGCTCGCCGC GGGCCCGCAT CAGGAGGCCC TGATGCAGAG CCTGTCGGGC ACCGGCTCGA TCCGCTTCGG CAAGGGCGAG TTCCGCGGGC TCGACGTGGC GCGGATGGTG CGCACGCTCG ATGCGGGCTC GGTGGGCGAG GGGACGCGCA CGATCTTCGA CAAGCTCGGC GCGAGCTTCA CTGTGGAGAA GGGCGTGCTG CGCAACGAGG ATCTGGCCCT CGAGGCGCCG CTGATGCGGG CAACGGGCGC GGGATCGGTG GGGATCGGCG ACCGGACGCT TGACTACCGG CTGCTTCCGA CGCTCCTGCC GCGCGAGGAC GGAACGGGCG GGGTGAGCGT TCCGGTGATC ATCGCCGGGC CCTGGGCGGG CCCGCGCACC CGGCTCGACC TTGATGCGCT GGTGCGTCAG CCGGTCGGGC AGCAGGTGAA GGAGCGGATG TCCGAGGAAG CGGCCGAGCG GCTGGGCGTC GTTCCGCAGG AGGGCGAGAG CCTCGAGGAG GCCGCCAAGC GCCGCGCCCG CGAGTCGCTC CAGAACGAGG CCGGGCGGGC GCTGAACAGG TTGCTCGGCG GGAACTGA
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Protein sequence | MLRPMATARL SAERSEVSMR WLIRLVAVLF GLVALFLVAL VLVPRDRLAE LAVRQFEAAT GRAMTISGEV RPSVWPKLGV RTGPVTIANA PWAAGEPLLE ARALEIGLDT LALMGGSWRI SRVALDEPVI RLERDAEGRA NWDLSRPAAA DPAPEADPSP ATAAGSAVSP FTLDEGIVTG GRVLWIDHGT GRRGDISGVQ ARVTLPESGG PADLTLSGQA NGRGFAVEGR LEEAGSALAG RVAPLRLSLA TGSARITFEG EAGSAPPMAD GRIDAALGDL GDLAALFGRP RPELPEGLGR RQLDIAGRLT LAEGGTLHLR EGRVTADGNR LAVEADMTPG GDRPKLEANV RAEALDLAGL PAPAAAAGPP GDGRQGWSRT PIDASALSAV DLGLALSAGS IDLGRLRLGA TKAILTLDRA RLVVDLREVA AYGGSLAGEL VVNGRQGLSL AADLTLSGLQ TEPLLADLAE FDRLATQGDV RLKLLAAGPH QEALMQSLSG TGSIRFGKGE FRGLDVARMV RTLDAGSVGE GTRTIFDKLG ASFTVEKGVL RNEDLALEAP LMRATGAGSV GIGDRTLDYR LLPTLLPRED GTGGVSVPVI IAGPWAGPRT RLDLDALVRQ PVGQQVKERM SEEAAERLGV VPQEGESLEE AAKRRARESL QNEAGRALNR LLGGN
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