Gene Rsph17025_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3006 
Symbol 
ID5084606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3071076 
End bp3072281 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID640484579 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001169197 
Protein GI146279038 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.230445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACA TCGTGGTGGT CGGAGCGGGA CAGGCGGGCG CGGCGCTGGT GGCCAAGCTG 
CGCGCGCTGA AGTTCGAGGG GAGCATCACG CTTCTGGGCG AGGAGCCGAG CCCGCCCTAC
CAGCGCCCGC CGCTGTCCAA GGCCTACCTG CTTGGCGCGA TGGAGGAAGA GCGGCTCTGG
CTGCGCAACC GGGCCTTCTA CGCCGAGGCC GGGATCGAAC TGCGTCTGGG GGCGCCGGTG
AGCGCCATCG ACCGGACCGC CCGCACCGTC ACCGTGGGCG GCGAGCGTCT GCCCTACGGC
CAGCTTGTCC TGACGACGGG GTCCATCGCC CGCCGCCTGC CCGAGGCCGC CGGCGGCGGG
CTGGACGGCG TGTTCACCGT CCGCACGCTT ACCGATGTCG ATGCGATGCG GCCCGAGTTC
CAGCCGGGGC GGCAGCTCGT GGTGATCGGG GGCGGCTATG TCGGGCTGGA GGCCGCGGCG
GTGGGGGCCA GACTGGGGCT CGACGTGACC GTGGTCGAGA TGGCGCCGCG CATCCTGCAG
CGCGTGGCCG CCCCCGAGAC GGCCGACTGG TTCCGCGCGC TTCACACCTC GCGCGGCGTC
CGCATCCGCG AGGGCGTGGC CCTCGACCGC CTGATCGGCG AAACGCGGGT GACGGGGGCC
CGGCTGACCG ACGGAACCGA GCTTCCGGCC GAATTCGTGA TCGCGGGCGT GGGCATCCGC
CCCGCCACGG AGCTGGCCGA GGCTGCGGGC ATCGCGCTCG ACAACGGGAT CGCGGTGGAT
GAAATGGGGC GCACCTCGGA CCCTGCGATC TGGTCGGCGG GCGACTGCGC CTCCTTTCCC
TGGAAAGGCG GCCGGTTGCG TCTCGAATCG GTTCAGAACG CCATTGATCA GGCCGAAGCG
GTGGCGGCCA ACTTGCTGGG GGCCAACCGG CCCTACCGGC CGATGCCCTG GTTCTGGTCG
GACCAGTTCG ACACCAAGCT CCAGATCGCG GGCCTCAATC TCGGATACGA CCGGGTGGTG
ACGCGAGGGC CCGAGGGCGA CTCGGTCTCC TTCTGGTATT ACCGGGGGCC CGAGCTTCTG
GCCGTGGATG CGGTGAACGA TCCCCGCGCC TACATGGTCG GCAAGCGCCT GATCGAGGCC
GGACGGAGCC CGGCACCCGA CACGGTGGCC AATCCCTCCA CGGCGCTCAA GTCGCTGCTC
GCATGA
 
Protein sequence
MPDIVVVGAG QAGAALVAKL RALKFEGSIT LLGEEPSPPY QRPPLSKAYL LGAMEEERLW 
LRNRAFYAEA GIELRLGAPV SAIDRTARTV TVGGERLPYG QLVLTTGSIA RRLPEAAGGG
LDGVFTVRTL TDVDAMRPEF QPGRQLVVIG GGYVGLEAAA VGARLGLDVT VVEMAPRILQ
RVAAPETADW FRALHTSRGV RIREGVALDR LIGETRVTGA RLTDGTELPA EFVIAGVGIR
PATELAEAAG IALDNGIAVD EMGRTSDPAI WSAGDCASFP WKGGRLRLES VQNAIDQAEA
VAANLLGANR PYRPMPWFWS DQFDTKLQIA GLNLGYDRVV TRGPEGDSVS FWYYRGPELL
AVDAVNDPRA YMVGKRLIEA GRSPAPDTVA NPSTALKSLL A