| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2974 |
|---|
| Symbol | |
|---|
| ID | 5085177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3039512 |
|---|
| End bp | 3040300 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640484545 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001169165 |
|---|
| Protein GI | 146279006 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0639393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATC TCATCGACAT CAGGGGCGTG ACCCACGCCT ATCGGACGCC GCTCGGCCCG
CTGCCGGTGC TGGAGGATCT GAACATCGCC GTTCCCGAAG GCGAGTTCTG CGCCGTCGTG
GGCCCCTCGG GCTGTGGCAA GTCCACCCTC ACGCGGCTGG TGGCGGGGCT GATGAAGCCC
GACCGCGGCG AGGTCTGGCT GCATGGCGAG CGCGTGACCT CGCCGCGCCG GACGGTGGGG
ATGGCGTTCC AGAACCCGGT GCTGCTCGAA TGGCGCACGA TCCTCGAGAA CGTGATCCTG
CCCCTCGAGA TCGTGGCCCC GCGGATGCCA CGCAAGGACC GGGTGGACCG CGCGATGGCG
CTGCTGGAAA TGGTGGGCCT CAAGGGCTTC GAGGCCAAGC GCCCGAGCCA GCTTTCGGGG
GGGATGCGCC AGCGCGCCTC GCTTTGCCGG GCAATCGTGC ACAAGCCCGA CGTGCTGATC
ATGGACGAGC CCTTCGGCGC GCTCGACAAT TTCACCCGCG AGGATCTGTG GCAGACGATG
CGCGACCTGC GCGCCGCCGA GCCCTTCACC TGCGTCCTGA TCACCCACGA CCTGCGCGAG
AGCGTCTTCC TCGGCGATCA GGTGATCGTG CTGTCGGGCC GCCCGGCCAG CACCCAGTTC
ATCCTGAACG TGGGCCTGCC CGCCGACCGG CGCATCGACG TCCTCTACAC GCCCGAGGCG
ACCGACATGC TGCACATCCT GCGCGACCAG ATCCGCATCG CGCAGGGGCG CGAGGGGGAG
GTGCACTGA
|
|---|
| Protein sequence | MANLIDIRGV THAYRTPLGP LPVLEDLNIA VPEGEFCAVV GPSGCGKSTL TRLVAGLMKP
DRGEVWLHGE RVTSPRRTVG MAFQNPVLLE WRTILENVIL PLEIVAPRMP RKDRVDRAMA
LLEMVGLKGF EAKRPSQLSG GMRQRASLCR AIVHKPDVLI MDEPFGALDN FTREDLWQTM
RDLRAAEPFT CVLITHDLRE SVFLGDQVIV LSGRPASTQF ILNVGLPADR RIDVLYTPEA
TDMLHILRDQ IRIAQGREGE VH
|
|---|
| |