| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2952 |
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| Symbol | |
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| ID | 5085155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 3014446 |
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| End bp | 3017448 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640484523 |
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| Product | exonuclease-like protein |
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| Protein accession | YP_001169143 |
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| Protein GI | 146278984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.034558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0831314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACG CGTCTTCCCT GTTCGAAGGG CCGGGCCCCC GCCTCTTCGG GCTGCCGCCC
GGCGTGGATT TCCCGGCGGC GCTGGTGCGG GGTCTGCGCG CCCGGATGGC CGGCGCCCCG
CCCGAGGCGA TGGCGCGGGT CGAGCTTTAC GTCAACACGC AGCGGATGCG GCGGCGGGTC
GTCGAGCTGA TGACGGCCGA GGGCGCGGGC TTCCTGCCGC GCATCCGCCT CGTGACCGAG
CTGCCGCCGG TGCCCGGCCT GCCCGCCCCC GTTCCGCCGC TGCGCCGGCG GCTGGAGCTT
GCGCAGCTCG TGGCGCGGCT GATCGAGGCG CAACCCGACA TCGCGCCCCG CTCGGCGCTC
TTTGACCTCT CGGACAGCCT TGCCGACCTG ATCGACGAGA TGCAGGGCGA GGGCGTGCCG
CCCGAGGCCA TCGCGCGGCT CGACGTGGCG GACCATTCGG CGCACTGGCA GCGGACGCAG
GCCTTCATGG CGATCGTGGC GCCGATGTTC GGGGCGGACG CACCCGACGC GCAGGCGCTG
GCGCGGATGA CGGTCGAGCG GATCGCCGCC CGCTGGGCCG AGGCGCCCCC CGATCATCCG
GTGATCGTCG CGGGCTCCAC CGGCTCGCGC GGGACGACGG CGCTCTTCAT GCAGGCGGTG
GCGCGGCTGC CGCAGGGCGC GCTGGTGCTG CCCGGCTTCG ACTTCGACCT GCCCGCCGAG
GTCTGGGACG GGCTGGGCGA TGCGCTGACC GCCGAGGACC ATCCCCAGTT CCGCTTTCAC
CGGCTGATGG GTCTCGTGGG GGCTGCGCCT TCTCAGGTGC ACCGCTGGAC CGACGAGGAC
CCGCCGAGCC CGGCGCGGAA CCGGCTGATC TCGCTCTCGC TCCGGCCCGC GCCGGTGACG
GACCAGTGGC TGACCGAGGG GCAGCGCCTG ACCGATCTCG CGCTTGCGGC CGAGGGCATG
GCGCTGATCG AGGCTGCAGG GCCGCGGGCC GAGGCGCTGG CCGTGGCGAT CATCCTGCGC
AAGGCCGCCG AAGACGGCCG GCGCGCGGCT CTCATCACCT CGGACCGGGG GCTCACGCGG
CAGGTGGCGG CGGCGCTCGA CCGCTGGGGG ATCGTGCCGG ACGATTCCGC GGGCCGCCCG
CTCGCCCTCT CGGCGCCGGG ACGGTTCCTG CGGCATGTGG CGCGTCTCTT CGGCCAGCGG
CTGACCGGCG AGGCGCTGCT CACGCTGCTC AAGCATCCGC TGACGGCCAC CGGCTCGGAC
CGCGGCAACC ACCTGCGCTG GACGCGGGAC CTGGAGTTGC ACCTGCGGCG CAAGGGGCCT
CCGTTCCCGA CGGGCGGCGA TCTGGATCTC TGGGCGGGGG CTCGGCCCGA CGACGGGGTG
GCGGACTGGG CGCGCTGGCT GGGCGGGCTG ATCGAGGGCC TCGATGCGGT GGGCAACCGC
CCCCTGTCCG ATCATGTCGC CGCCCATCTG GCGCTGGCGG AGGCTTTGGC CGCGGGACCA
GCCGGCACGG GCACGGGCGA GCTGTGGCTG AAGGAGGCGG GTGAGGCCGC GCGCGCCGCC
GTCGAGGAGT TGCGCCGCGA GGCACCGCAC GGGGGCGAGC TGACCACCGC GGACTACACC
GACCTCTTCG ACGCGATCCT CGCCCGCGGC GAGGTGCGCG AGGCGGTGCA GGCCCATCCC
GGCCTGATGA TCTGGGGCAC GCTCGAGGCG CGCGTGCAGG GGGCCGATCT CGTGATCCTC
GGCGGCCTCA ATGACGGGAC ATGGCCGCAA CTGCCGCCGC CCGATCCGTG GCTCAACCGG
CAGATGCGGC TCCGGGCGGG GCTTCTTCTC CCCGAACGGC GGATCGGCCT CTCGGCGCAC
GACTACAGCC AGGCGGTCGC CGCGCCCGAG GTGGTGCTGA CCCGCGCCAC CCGCAACGCC
GAGGCCGAAA CGGTGCCGTC GCGCTGGCTG AACCGGCTGA TGAACCTGAT GAGCGGGCTG
AAGGCGCAGG GCGGGCCCGA GGCGCTGGAG GCGATGCGCG CGCGGGGACG CGGCTGGCTG
GCGCTCGCCT CGGCGCTGGA GCAGCCCGAG GCGCCGGTGC CGCTGGCCGC GCGGCCCGCG
CCGCAGCCGC CCGTTTCGGC GCGGCCCGAC CGGCTGGCCG TGACCGGCAT CCGCACGCTG
ATCCGCGACC CTTACGCAAT CTATGCCCGC CACATCCTGC GACTCTATCC GCTCGATCCG
CTGCATCGGG CGCCGGATGC CCGGCTGCGC GGCTCGATCC TGCACCGCAT CCTCGAGGAG
TTCGTGAAGG ACCGCGCGCC GGGGACCGAC CGCGCCGCCG AGCGCGCGCG CCTGATGCGG
ATCGCCGAAA CGGTGCTGAC GGACGAGGTG CCATGGCCCG CCGCCCGCGC ACTGTGGCTT
GCCCGGCTCG ACCGGGCGGC GGATTTCTTC CTCGAGACCG AGGCGGCGCA TGGCGGAACC
CCGGTCGTGC TGGAAGAGGA GGGCCGCGTG GACCTCGCGC CCCTGCGCTT CACGCTGACG
GCCAAGCCGG ACCGGATCGA CAGGCTGCCC GATGGCCGGC TGCATATCCT CGACTACAAG
ACCGGAACCC CGCCCACCAG GAAGCAGCAG GAGCAGTTCG ACAAGCAGCT TCTGCTCGAG
GCGGCGATGG CCGAGCACGG CGGCTTTCGC AAACTGGGGC CCACGGACGT GGCGCGGATC
AGCTACATCG GCCTCGGATC GAGCCCCAAG GTGGAGAGTG TCGAGACCGA CGCGGCCCTT
CTGGGGCAGG TCTGGGAGGG GCTTCACGCC CTTGTCGGCC GCTACCTGCG GCGCGAGCAG
GGCTATGTCT CGCGCCGGGC CATGTTCGGC GAGCGGTTCC CCGGCGACTA CGACCATCTC
GCGCGGTTCG GCGAGTGGGA GATGAGCGAC AGCCCCGTGC CGGTGCCGGT GGGGGAAGAG
GCGGGCGCGC CGTCCGGCGA GGCCCGCCCG CGCGACAGGA CGCGCCCGGA GGATGCCGCA
TGA
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| Protein sequence | MLDASSLFEG PGPRLFGLPP GVDFPAALVR GLRARMAGAP PEAMARVELY VNTQRMRRRV
VELMTAEGAG FLPRIRLVTE LPPVPGLPAP VPPLRRRLEL AQLVARLIEA QPDIAPRSAL
FDLSDSLADL IDEMQGEGVP PEAIARLDVA DHSAHWQRTQ AFMAIVAPMF GADAPDAQAL
ARMTVERIAA RWAEAPPDHP VIVAGSTGSR GTTALFMQAV ARLPQGALVL PGFDFDLPAE
VWDGLGDALT AEDHPQFRFH RLMGLVGAAP SQVHRWTDED PPSPARNRLI SLSLRPAPVT
DQWLTEGQRL TDLALAAEGM ALIEAAGPRA EALAVAIILR KAAEDGRRAA LITSDRGLTR
QVAAALDRWG IVPDDSAGRP LALSAPGRFL RHVARLFGQR LTGEALLTLL KHPLTATGSD
RGNHLRWTRD LELHLRRKGP PFPTGGDLDL WAGARPDDGV ADWARWLGGL IEGLDAVGNR
PLSDHVAAHL ALAEALAAGP AGTGTGELWL KEAGEAARAA VEELRREAPH GGELTTADYT
DLFDAILARG EVREAVQAHP GLMIWGTLEA RVQGADLVIL GGLNDGTWPQ LPPPDPWLNR
QMRLRAGLLL PERRIGLSAH DYSQAVAAPE VVLTRATRNA EAETVPSRWL NRLMNLMSGL
KAQGGPEALE AMRARGRGWL ALASALEQPE APVPLAARPA PQPPVSARPD RLAVTGIRTL
IRDPYAIYAR HILRLYPLDP LHRAPDARLR GSILHRILEE FVKDRAPGTD RAAERARLMR
IAETVLTDEV PWPAARALWL ARLDRAADFF LETEAAHGGT PVVLEEEGRV DLAPLRFTLT
AKPDRIDRLP DGRLHILDYK TGTPPTRKQQ EQFDKQLLLE AAMAEHGGFR KLGPTDVARI
SYIGLGSSPK VESVETDAAL LGQVWEGLHA LVGRYLRREQ GYVSRRAMFG ERFPGDYDHL
ARFGEWEMSD SPVPVPVGEE AGAPSGEARP RDRTRPEDAA
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