| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2951 |
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| Symbol | |
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| ID | 5085154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 3011097 |
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| End bp | 3014456 |
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| Gene Length | 3360 bp |
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| Protein Length | 1119 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640484522 |
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| Product | UvrD-like DNA helicase, C terminal |
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| Protein accession | YP_001169142 |
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| Protein GI | 146278983 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0785704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.12863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCATG AGACGCCCGT CCGATTCCGC CGGAGCCGCG CCATGAGCCG CCGCAGGGAC
GAGGCGTCCG AGCGGCAGGT GCAGGCCGCC GACCCGCGGG CCTCGACTTG GCTTTCGGCC
AATGCGGGCT CGGGCAAGAC GCGGGTGCTG ACCGACCGGG TGGCGCGGCT GCTGCTGGAC
GGGGTCGAGC CGCAGCGCAT CCTCTGCCTG ACCTACACCA AGGCCGCCGC CTCCGAGATG
CAGAACCGGC TGTTCCGGCG GCTGGGCGAA TGGGCGATGC TCGAGGACGC CGCGTTGCGC
GCCGCGCTCG ATGCGCTGGG GGTGGAGGCG GTCGGGCACG AGGTGCTGGC GCAGGCCCGC
CGGCTCTTCG CCCGCGCCAT CGAGACGCCG GGCGGGTTGC GGATCCAGAC GATCCACTCC
TTCTGCGCGA CGCTCTTGCG CCGCTTCCCG CTCGAGGCGG GCGTCTCGCC GCAATTCACC
GAACTCGACG ACCGCGCGGC GCGCCTCTTG CGCGACGAGA TCCTTGAAGA GATGGCCGAC
CGCACCGCGC CCGCGCTGGT GGCCGAGCTG GCCCGCGCCT ACACGGGCGA GGAGTTCGGC
GCGCTGGCCG AAGAGGTGGC GCGCAACCGG GCGGGCCTCG TGCCGCCGCT GGACGCCGCC
GCCTGCCGCG CGCTCTATGG CGTGACGGGC GGGGCGGACG AGCTGCTTGC GCAGGTCTTC
CTCGGCGGCG AAGAGGAGTG GATGCCCGGC CTGACCGCCG CGCTCGAGGC GGGATCGGCC
AACGACCAGA AGGCGGCGGC GAAGCTGCGG CTTCTGTCCT TCTCGGCGCC GACGACCGCG
ACGCTGGCGG GGCTCGAGGG GGTGCTGCTG ACGGGCGCCT CGGCAAAGGA GCCCTACACG
GCCAAGATCG GCAGCTTCCC GACCAAGGCC ACGCGCGGCG CGCTCGGGCC GCTCGCCGAC
CGGCTCGAGG CGCTCATGCG CCGGGTCGAG GCGGCGCGCC CGGTCCGCTG CTGCCTGCTG
GCGGCTGAGC GCGCGCGGCT GATCCACGCC TTCGCGGGCG TCTTCCTGCC GCTCTACGAG
GCGCGCAAGG CCGCGCGCGG CTGGCTCGAT TTCGACGACC TGATCCAGCG CGCCAAGGGG
TTGCTGACCG ATCCGTCCGT GGCGCAGTGG GTGCTGTTCC GGCTTGACGG CGGCATCGAC
CACATCCTCG TGGACGAAGC GCAGGACACC AGCCCCGACC AGTGGAAGGT GATCGAGCTT
CTCGCGCAGG AGTTCACCGC CGGCCGCGGC GCGCGCGAGG TCGAGCGGAC GATCTTCGTC
GTGGGCGACA AGAAGCAGTC GATCTATTCC TTTCAGGGCG CGGACGTGGC GGCCTTCGAC
CGGATGCGGG CCGAGTTCGG CGAGCGCCTC GCGGGGGCCG AGCGGCGGCT GGAAGAGCTG
GACCTGCTCC ATTCCTTCCG CTCCTCGCCC ACGATCCTGC GGCTGGTGGA CCTGACCTTC
GACGAGCGGC GTCGGCAGGA TCTGGGCGGC GAGGTCCGTC ACATCGCCTT CCGCTCGGAC
ATGCCGGGGC GGGCCGAACT CTGGCCGCTG GTCGAGGCCG CGACCGAGCC CGAACCCGAG
AACTGGTTTG ATCCGGTCGA TCTCGTCTCG GACGAGCATC ACGCGGCGCG GCTGGCGCGG
CAGGTCGCCG CCCGCATCCG CGCCATGATC GAGGAGGGCG TGCAGATCCC GCAGCCGGGC
GGTTTCCGCC CCGTCGCGGC GGGCGATTTT CTGATCCTCG TCCAGCGGCG GTCGGACATC
TTTGGCGAGA TCATCCGCGC CTGCAAGGAG GCGCGCCTGC CCATCGCCGG GGCCGACCGG
CTGAAGCTGG GGGCCGAGCT TGCGGTGCGC GACCTGTCGG CACTCCTGGC CTTTCTCGCG
ACGCCCGAGG ACGATCTCTC GCTCGCGGCC GTGCTGCGCT CGCCGCTCTT CGGCTGGAGC
GAGGCGGAGC TGTTCGATCT GGCGCACGGG CGCGAGGGCT ATCTCTGGCG CCGGCTGCGC
GAGCGCGAGG CGACCCATCC CGAGACGGTC GCCATCCTGC GCGACCTGCG CGATCAGGCC
GACTTCCTGC GCCCGTTCGA CCTGATCGAG CGCGCGCTGA CGCGCCACGA CGGCCGCCGC
CGGCTGCTGG CGCGGCTGGG CGAAGAGGCC GAGGATGGCA TCGACGAACT TCTGAGCCAG
GCGCTGGCCT ACGAGCGGAC CGACGTGCCG AGCCTGACCG GCTTCCTGAC GTGGCTCCAG
ACCGACGAGG TCGAGGTGAA GCGGCAGATG GAGGCCGCGG GCGGGCGCAT CCGGGTGATG
ACGGTGCATG GCTCGAAGGG GCTCGAGGCG CCGATCGTGA TCCTGCCCGA CACGGCCGAC
CGCAAGCCAC GCGAGCATGA CGAGATCTTC ACGCTCGATT GCGGCGCGCG GGTCTGGAAG
ACGCCGGCCC CCGAGAGCCC GCCGCAGATC GCCGCCGCGC GTGAGGCCCG GCGGGCGCGG
GACGCGGCCG AGAACCTGCG GCTGCTCTAT GTGGCCATGA CGCGGGCGCA ATGCTGGCTG
ATCGCGGCGG CGGCCGGCAA GCTCGAGAGC GGCGGCGCCT GGCATGATCT GATCCGGCAA
GGGATGGAGG CCGCGGGCGC CGAGCGGCGG GCGGACGGCA CGCTGCTGCT CGTCGAAGGG
GACTGGCCCG CCCCCGCGCC GCGCCCCGCC GCGCCCGAGG CCGGGCGCCC GGCCCTGCCC
GGCTGGGCCC GGATCCATGC GGCCGCCCCC GTGGCCGCGC CGGGGCTGCT CTTGCCGTCG
GATCTGGGCG GGGCAAAGGC GCTGCCGGGC GAGGCCCTGC CCACCGAACT GGCGCTGGCC
CGCGGCTCGG CCGTTCACCG GCTGCTCGAG CATCTGCCGC TCCATCCGCC GGAGACGTGG
GACGAGGTGG CACGGGGGCT TCTGCCCGAC CTGGGGGATC TCGGGGACGT GCTCGAGGAG
GTTCGGGCGG TTCTTTCGGC CGAGGATCTG GGCGCGGCGC TGGTACCCCA CGCGCTTATC
GAGGTGCAGG TCACGGCCGA GGTTGCCGGG CGGCGGCTCT TCGGCACGAT CGACCGGCTG
GTGGTGGACC CGGACCGGGT GCTGGCCGTG GACTACAAGA CCAACATGGT GGTGCCGGCG
CGGCCCGAGG AGGTGCCGGA GGGCATCCTG CGCCAGATGG GCGCCTACGC CGAAGCCCTG
GCCCGGATCT ACCCGGATCG CGAGGTCGAG ACCGCGATCC TGTGGACGCG GACGGCGAGC
CTGATGCGGC TGCCACGCGA TATCGTGAGG TCGGCCCTTG CTCGAGCCAC GACAACTTGA
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| Protein sequence | MPHETPVRFR RSRAMSRRRD EASERQVQAA DPRASTWLSA NAGSGKTRVL TDRVARLLLD
GVEPQRILCL TYTKAAASEM QNRLFRRLGE WAMLEDAALR AALDALGVEA VGHEVLAQAR
RLFARAIETP GGLRIQTIHS FCATLLRRFP LEAGVSPQFT ELDDRAARLL RDEILEEMAD
RTAPALVAEL ARAYTGEEFG ALAEEVARNR AGLVPPLDAA ACRALYGVTG GADELLAQVF
LGGEEEWMPG LTAALEAGSA NDQKAAAKLR LLSFSAPTTA TLAGLEGVLL TGASAKEPYT
AKIGSFPTKA TRGALGPLAD RLEALMRRVE AARPVRCCLL AAERARLIHA FAGVFLPLYE
ARKAARGWLD FDDLIQRAKG LLTDPSVAQW VLFRLDGGID HILVDEAQDT SPDQWKVIEL
LAQEFTAGRG AREVERTIFV VGDKKQSIYS FQGADVAAFD RMRAEFGERL AGAERRLEEL
DLLHSFRSSP TILRLVDLTF DERRRQDLGG EVRHIAFRSD MPGRAELWPL VEAATEPEPE
NWFDPVDLVS DEHHAARLAR QVAARIRAMI EEGVQIPQPG GFRPVAAGDF LILVQRRSDI
FGEIIRACKE ARLPIAGADR LKLGAELAVR DLSALLAFLA TPEDDLSLAA VLRSPLFGWS
EAELFDLAHG REGYLWRRLR EREATHPETV AILRDLRDQA DFLRPFDLIE RALTRHDGRR
RLLARLGEEA EDGIDELLSQ ALAYERTDVP SLTGFLTWLQ TDEVEVKRQM EAAGGRIRVM
TVHGSKGLEA PIVILPDTAD RKPREHDEIF TLDCGARVWK TPAPESPPQI AAAREARRAR
DAAENLRLLY VAMTRAQCWL IAAAAGKLES GGAWHDLIRQ GMEAAGAERR ADGTLLLVEG
DWPAPAPRPA APEAGRPALP GWARIHAAAP VAAPGLLLPS DLGGAKALPG EALPTELALA
RGSAVHRLLE HLPLHPPETW DEVARGLLPD LGDLGDVLEE VRAVLSAEDL GAALVPHALI
EVQVTAEVAG RRLFGTIDRL VVDPDRVLAV DYKTNMVVPA RPEEVPEGIL RQMGAYAEAL
ARIYPDREVE TAILWTRTAS LMRLPRDIVR SALARATTT
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