Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2890 |
Symbol | |
ID | 5083238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 2945202 |
End bp | 2946791 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640484460 |
Product | extracellular solute-binding protein |
Protein accession | YP_001169081 |
Protein GI | 146278922 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.271762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCT TGCCGCTCCG CACCGGGGCC TGTCTTCTCG CGATGATCGT TGCAGGCGCC GGCGCTGCCG CCGCGCAGGT GACCCTTGTC CGGGGCAACG ACACCGATCC CGCGACGCTC GACCATCACC TGACCTCGAC CGTGGCCGAG AGCCGGATCC TGAACGATCT CTACGAGGGG CTCGTGGTGC AGGATGCGCG GGGCGAGGTG GTGCCGGGGG TGGCCGAGAG CTGGGAGATC TCGGAGGATG GTCTGACCTA CAGCTTCAAG CTGCGCGACG ATGCGAAATG GTCGAATGGC GATCCGGTGG TGGCCGGAGA CTTCGTCTTC GCGCTGCGCC GGATCGTGAC GCCCGCGACG GCGGCGGTCT ATGCCAACAT CCTCTACCCG ATCCTGAACG CCGAAGCCGT CGCCTCGGGC CAGATGACCC CGGAAGAGCT GGGGGTCGAG GCGGTGGATG ATCATACGCT GCAAATCACC CTGAACGCGC CCACCCCCTA CTTCCTCGAA CTGCTCACGC ACCAGTCCTC GCTGCCGCTG CACCCGGCGA CGGTCGAGGC GGAAGGCGCG AACTTCACGC GGCCCGGCGT GATGGTCACG AACGGCGCCT ACAAGCTGGT CAGCTTCGTG CCGAACGACC GCATCGTCAT GGAGAAGAAT GAGCATTTCC ACGGCGCGCA GGACATCGCC GTCGATCGCG TCGAATGGGT GCCCTTCGAG GATCGCTCGG CCTGCCTGCG GCGCTTCGAG GCGCAGGAGG TGCAGATCTG CACCGACGTG CCCGCCGAAC AGATGAGCTA CATGCGCCAG AACCTCGGCG AGCAGCTGCG CATCGCGCCC TACCTCGGCA CCTACTACCT GCCGGTGAAG GGCGCCGACG GCAGCCCGCT CAAGGACAAG CGCGTGCGTC AGGCGATCTC GCTCGTGCTC GACCGCGACT TCATCGCCGA GCAGGTCTGG CAGGAGACGA TGCTGCCCGG CTACTCGATC GTCCCGCCGG GCATCTCGAA CTATGTCGAG ACGCCCCCCT CGCTCGATTA TGCCGAAGAG GATCTGCTTG ACCGCGAGGA CCGGGCCAAG GCGCTCCTTG AGGAAGCGGG CGTGGCCGAG GGCAGCCTGA CCGTGCAGCT CTCCTACAAC TCGTCCGAGA ACCATCGCAA TACGATGACC GCCATCGCCG ACATGCTGAA GAACATCGGC ATCAACGCGA CGCTGAACGA GATGGAGGGG ACGAACTACT TCAACTACCT CAAGGAAGGC GGCGCCTTCG ACATCGTGCG CGCGGGCTGG ATCGGCGACT ATTCCGACCC GCAGAACTTC CTGTTCCTGT TCGAGGGCGG CGTGCCCTTC AACTATCCGC GCTGGGAGAA CGCCGATTAC GACGCGCTGA TGGACAGGGC CGCCCAGACC CAGGATCTCG ACGAGCGGGC ACAGATCATG GCCGAGGCCG AGACGATCCT GCTCGACGAG GTGCCGGCGA TCCCGCTGCT CACCTACTCC TCGCGCGCGC TCGTTTCGGA CCGGGTGCAG GGCTACGAGG ACAACCTGCC CGACGTCCAC CAGACCCGCT GGCTCTCGCT GTCCCAGTAA
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Protein sequence | MTRLPLRTGA CLLAMIVAGA GAAAAQVTLV RGNDTDPATL DHHLTSTVAE SRILNDLYEG LVVQDARGEV VPGVAESWEI SEDGLTYSFK LRDDAKWSNG DPVVAGDFVF ALRRIVTPAT AAVYANILYP ILNAEAVASG QMTPEELGVE AVDDHTLQIT LNAPTPYFLE LLTHQSSLPL HPATVEAEGA NFTRPGVMVT NGAYKLVSFV PNDRIVMEKN EHFHGAQDIA VDRVEWVPFE DRSACLRRFE AQEVQICTDV PAEQMSYMRQ NLGEQLRIAP YLGTYYLPVK GADGSPLKDK RVRQAISLVL DRDFIAEQVW QETMLPGYSI VPPGISNYVE TPPSLDYAEE DLLDREDRAK ALLEEAGVAE GSLTVQLSYN SSENHRNTMT AIADMLKNIG INATLNEMEG TNYFNYLKEG GAFDIVRAGW IGDYSDPQNF LFLFEGGVPF NYPRWENADY DALMDRAAQT QDLDERAQIM AEAETILLDE VPAIPLLTYS SRALVSDRVQ GYEDNLPDVH QTRWLSLSQ
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