Gene Rsph17025_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_2839 
Symbol 
ID5084217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp2893325 
End bp2894188 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID640484409 
Productamidohydrolase 2 
Protein accessionYP_001169030 
Protein GI146278871 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.975955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.522178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ACTTCTCCTC GCGTCCGCCG CACCCGGATT TCTCGCCCGC CGCCCCGCAT 
CTGGAGAATT ACCGCCGGGT CTATCAGGCG AGCGAGCGCC GCTCGGCCGC CTCGGACGCG
GCTCAGGGGC TCTACAGCTG GCTCGAGACC TACGACCGGC TGGGCGCGCG CCATGTGGTG
CTGAAGGCCC GCGACCTGAC CACGACCTTC GGCTTCCAGA TCTCCAACGA GGCGGTGGCC
GGGTTCATCC GGGCGCACGG CCCGCGCTAT GTGGGCTTTG CCGGCGTCGA TCCCTGGCAG
GCCGATGCGG TGGACCGTTT CGACCATGCG ATCCGCCATC TCGGGCTGCG GGGGCTCAAC
CTGCAATGTT TCGAGCTGAA GATGCGCCCC GACGACGAGC GGCTCTTTCC GCTCTACGAG
AAGGCCATCG ACCTCGGCGT GCCGGTGAAC ATCCATTGCG GCATCAACTT CTCGACCCAC
ACGCCCATGT CGATCGGCCG CCCGGAATAT CTCGACAATG TCATGGTGCG CTATCCCGAA
CTGCGCGCCG TGGCCTCGCC GCCCGGCTGG CCCTGGGTGC AGGAGCTGAT CGGCGTCGCC
TGGCGCCATC CCAACCTCTC CATCGGGGTC CTGGCCGTCC GGCCGAAACT TCTCGCCAAG
GCGCATTCGG GCTACGAGCC GCTGCTGCAA TACGGCCGCA CCCTCCTGAA GGAGAAGATC
ATCTTCGGAT CGGCTTTTCC GATGATGCCG GTCGAGACAG CTTTGGCCGA ACTCGACACG
CTGGGGCTCG ATGCGGACAC GCGCCGGCTC TGGCTCCATG ACAATGCGGC GCGGCTTCTG
GGGCTCGAAC CCGCCGGAAC TTGA
 
Protein sequence
MLIDFSSRPP HPDFSPAAPH LENYRRVYQA SERRSAASDA AQGLYSWLET YDRLGARHVV 
LKARDLTTTF GFQISNEAVA GFIRAHGPRY VGFAGVDPWQ ADAVDRFDHA IRHLGLRGLN
LQCFELKMRP DDERLFPLYE KAIDLGVPVN IHCGINFSTH TPMSIGRPEY LDNVMVRYPE
LRAVASPPGW PWVQELIGVA WRHPNLSIGV LAVRPKLLAK AHSGYEPLLQ YGRTLLKEKI
IFGSAFPMMP VETALAELDT LGLDADTRRL WLHDNAARLL GLEPAGT