| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2827 |
|---|
| Symbol | |
|---|
| ID | 5084737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2877418 |
|---|
| End bp | 2877915 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640484397 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_001169018 |
|---|
| Protein GI | 146278859 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2323] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.138476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCG GGAGTGCAAG GATGAACGAA CCGATCTTCC TCGACAGCTG GGCGGGGCTT
GCGCGGACCG TCGTGGTCGG AATTGCCGCC TACGGCTTGC TCATCGCGAT GCTGCGGGCC
TCCGGCAAGC GCACCCTGAG CAAGATGAAC GCGTTCGACT TCGTCGTGAC GGTCGCGCTT
GGCTCCACTC TGGCGACGGT TCTGCTCAAC CGGTCGGTGC CGCTGGCCGA AGGGGTCGCG
GCGCTGGCGC TGCTGATCTG CCTGCAATAT GCCATAACCT GGCTCGCCGT CCGGGTCCCG
GCCGTGCAGG CGCTGGTCAA GAGCGAGCCG ACGCTGCTGC TGCACGACGG CTGCTTCCTG
GACCAGGCCC TGAAGCGCCA GCGCGTGACC CGCGACGAGG TGCTTGCGGC GTTGCGGCAG
AGCGGCACGG ACGATCCGGC TGGCGCGCGC TCCGTCGTGC TCGAGACCGA CGGCAGCCTG
AGCGTCATCC CCCGCTAG
|
|---|
| Protein sequence | MNSGSARMNE PIFLDSWAGL ARTVVVGIAA YGLLIAMLRA SGKRTLSKMN AFDFVVTVAL
GSTLATVLLN RSVPLAEGVA ALALLICLQY AITWLAVRVP AVQALVKSEP TLLLHDGCFL
DQALKRQRVT RDEVLAALRQ SGTDDPAGAR SVVLETDGSL SVIPR
|
|---|
| |